RNA–Protein interactions for RNA: ENST00000319170.9

RAPH1-202, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPH1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-202ENST00000319170 TCAPO15273 167 aa12.98□□□□□ -0.33
RAPH1-202ENST00000319170 CYB561P49447 251 aa12.98□□□□□ -0.33
RAPH1-202ENST00000319170 OR5I1Q13606 314 aa12.98□□□□□ -0.33
RAPH1-202ENST00000319170 SCARB1Q8WTV0 552 aa12.98□□□□□ -0.33
RAPH1-202ENST00000319170 FBXO8Q9NRD0 319 aa12.98□□□□□ -0.33
RAPH1-202ENST00000319170 SSC5DA1L4H1 1573 aa12.98□□□□□ -0.33
RAPH1-202ENST00000319170 SH2D1BO14796 132 aa12.98□□□□□ -0.33
RAPH1-202ENST00000319170 SLC5A10A0PJK1 596 aa12.98□□□□□ -0.33
RAPH1-202ENST00000319170 ZNF724A8MTY0 619 aa12.98□□□□□ -0.33
RAPH1-202ENST00000319170 RFX2P48378 723 aa12.98□□□□□ -0.33
RAPH1-202ENST00000319170 C1orf140Q5VVS0 124 aa12.98□□□□□ -0.33
RAPH1-202ENST00000319170 VRK3Q8IV63 474 aa12.98□□□□□ -0.33
RAPH1-202ENST00000319170 ZNF251Q9BRH9 671 aa12.98□□□□□ -0.33
RAPH1-202ENST00000319170 DDX60LQ5H9U9 1706 aaKnown RBP12.98□□□□□ -0.33
RAPH1-202ENST00000319170 TAPBPO15533 448 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 OR10R2Q8NGX6 335 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 APH1AQ96BI3 265 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 LURAP1Q96LR2 239 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 C7orf72A4D263 438 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 ZNF749O43361 778 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 TACR1P25103 407 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 LKAAEAR1Q8TD35 194 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 TIMD4Q96H15 378 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 THOC3Q96J01 351 aaKnown RBP12.97□□□□□ -0.33
RAPH1-202ENST00000319170 PRR14Q9BWN1 585 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 SLC22A11Q9NSA0 550 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 PRRC2BQ5JSZ5 2229 aaKnown RBP12.97□□□□□ -0.33
RAPH1-202ENST00000319170 A0A0A6YYJ9 748 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 GLAP06280 429 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 EXT1Q16394 746 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 H1FNTQ75WM6 255 aaPredicted RBP12.97□□□□□ -0.33
RAPH1-202ENST00000319170 ARFGAP1Q8N6T3 406 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 FAM71CQ8NEG0 241 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 HLA-CQ95604 372 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 H2AFB1P0C5Y9 115 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 LIM2P55344 173 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 CRMP1Q14194 572 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 LGI3Q8N145 548 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 SLC24A4Q8NFF2 622 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 UBTD2Q8WUN7 234 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 LGI1O95970 557 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 HCCSP53701 268 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 COA3Q9Y2R0 106 aaPredicted RBP12.97□□□□□ -0.33
RAPH1-202ENST00000319170 HSF1Q00613 529 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 ZNF85Q03923 595 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 KCNAB1Q14722 419 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 MRPL43Q8N983 215 aaKnown RBP12.97□□□□□ -0.33
RAPH1-202ENST00000319170 ST8SIA2Q92186 375 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 SCN1AP35498 2009 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 HOXC8P31273 242 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 DHCR7Q9UBM7 475 aaKnown RBP12.97□□□□□ -0.33
RAPH1-202ENST00000319170 TRDV1A0A1B0GX56 115 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 ZC3H12DA2A288 527 aaKnown RBP12.97□□□□□ -0.33
RAPH1-202ENST00000319170 OR5B3Q8NH48 314 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 FIZ1Q96SL8 496 aa12.97□□□□□ -0.33
RAPH1-202ENST00000319170 SLC25A21Q9BQT8 299 aaPredicted RBP12.97□□□□□ -0.33
RAPH1-202ENST00000319170 PPP5D1E7EU14 171 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 KIAA1024LP59773 190 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 PRAMEF5Q5TYX0 476 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 PRAMEF6Q5VXH4 476 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 CORO2AQ92828 525 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 OR6C68A6NDL8 312 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 TLCD2A6NGC4 264 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 FAM166BA8MTA8 275 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 ICMTO60725 284 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 ATP1B1P05026 303 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 SNRPGP62308 76 aaKnown RBP12.96□□□□□ -0.33
RAPH1-202ENST00000319170 MS4A8Q9BY19 250 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 TRABD2BA6NFA1 517 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 PIGAP37287 484 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 FBXO46Q6PJ61 603 aaPredicted RBP12.96□□□□□ -0.33
RAPH1-202ENST00000319170 ZNF511Q8NB15 262 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 TOGARAM1Q9Y4F4 1720 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 GPR171O14626 319 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 RRP8O43159 456 aaKnown RBP12.96□□□□□ -0.33
RAPH1-202ENST00000319170 CALCBP10092 127 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 DUSP6Q16828 381 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 C4orf17Q53FE4 359 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 OR2B11Q5JQS5 317 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 LHFPL2Q6ZUX7 228 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 VPS25Q9BRG1 176 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 NDFIP1Q9BT67 221 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 PDLIM7Q9NR12 457 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 KIAA0141Q14154 515 aaPredicted RBP12.96□□□□□ -0.33
RAPH1-202ENST00000319170 NHSL2Q5HYW2 709 aa12.96□□□□□ -0.33
RAPH1-202ENST00000319170 M0R1B8 84 aa12.96□□□□□ -0.34
RAPH1-202ENST00000319170 MT-ATP6P00846 226 aa12.96□□□□□ -0.34
RAPH1-202ENST00000319170 APEX1P27695 318 aaKnown RBP12.96□□□□□ -0.34
RAPH1-202ENST00000319170 ZNF90Q03938 601 aa12.96□□□□□ -0.34
RAPH1-202ENST00000319170 TOR2AQ5JU69 321 aa12.96□□□□□ -0.34
RAPH1-202ENST00000319170 TMEM123Q8N131 208 aa12.96□□□□□ -0.34
RAPH1-202ENST00000319170 OR51F2Q8NH61 342 aa12.96□□□□□ -0.34
RAPH1-202ENST00000319170 SLC23A1Q9UHI7 598 aa12.96□□□□□ -0.34
RAPH1-202ENST00000319170 SMCHD1A6NHR9 2005 aa12.96□□□□□ -0.34
RAPH1-202ENST00000319170 SLC35B4Q969S0 331 aa12.96□□□□□ -0.34
RAPH1-202ENST00000319170 SLC25A6P12236 298 aa12.96□□□□□ -0.34
RAPH1-202ENST00000319170 FPR3P25089 353 aa12.96□□□□□ -0.34
RAPH1-202ENST00000319170 SUMO1P63165 101 aaKnown RBP12.96□□□□□ -0.34
RAPH1-202ENST00000319170 OR6M1Q8NGM8 313 aa12.96□□□□□ -0.34
RAPH1-202ENST00000319170 PLXDC2Q6UX71 529 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms