RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 HSF1Q00613 529 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 EGR3Q06889 387 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 GALEQ14376 348 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 CTU2Q2VPK5 515 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 PAQR6Q6TCH4 344 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF584Q8IVC4 421 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 CMTM1Q8IZ96 169 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 BEST3Q8N1M1 668 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 FAM71CQ8NEG0 241 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 FBXO34Q9NWN3 711 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 HS3ST3B1Q9Y662 390 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 A0A1B0GVC2 190 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 FAM230AA0A1W2PPH8 454 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 C21orf33P30042 268 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 PCOLCEQ15113 449 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 AADACL4Q5VUY2 407 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 Q6ZPB1 254 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 GDPD3Q7L5L3 318 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 LRRC20Q8TCA0 184 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 Q96M85 177 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 METTL8Q9H825 291 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 BARX1Q9HBU1 254 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 CYSLTR2Q9NS75 346 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 TAS2R16Q9NYV7 291 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 LUZP4Q9P127 313 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 POLDIP2Q9Y2S7 368 aa7.72□□□□□ -1.17
PDLIM5-201ENST00000317968 CACNA1HO95180 2353 aa7.71□□□□□ -1.17
PDLIM5-201ENST00000317968 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.71□□□□□ -1.17
PDLIM5-201ENST00000317968 H3BMQ9 156 aa7.71□□□□□ -1.17
PDLIM5-201ENST00000317968 DOK2O60496 412 aa7.71□□□□□ -1.17
PDLIM5-201ENST00000317968 CDRT1O95170 752 aa7.71□□□□□ -1.17
PDLIM5-201ENST00000317968 MSR1P21757 451 aa7.71□□□□□ -1.17
PDLIM5-201ENST00000317968 HTR2AP28223 471 aa7.71□□□□□ -1.17
PDLIM5-201ENST00000317968 CASP3P42574 277 aa7.71□□□□□ -1.17
PDLIM5-201ENST00000317968 ZP4Q12836 540 aa7.71□□□□□ -1.17
PDLIM5-201ENST00000317968 FAPQ12884 760 aa7.71□□□□□ -1.17
PDLIM5-201ENST00000317968 SMN1Q16637 294 aaKnown RBP7.71□□□□□ -1.17
PDLIM5-201ENST00000317968 VASNQ6EMK4 673 aa7.71□□□□□ -1.17
PDLIM5-201ENST00000317968 OR51T1Q8NGJ9 327 aa7.71□□□□□ -1.17
PDLIM5-201ENST00000317968 ABHD4Q8TB40 342 aa7.71□□□□□ -1.17
PDLIM5-201ENST00000317968 HHLA2Q9UM44 414 aa7.71□□□□□ -1.17
PDLIM5-201ENST00000317968 AHCTF1Q8WYP5 2266 aa7.71□□□□□ -1.17
PDLIM5-201ENST00000317968 RAF1P04049 648 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 RBMXP38159 391 aaKnown RBP7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 SOX2P48431 317 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 FOXF1Q12946 379 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 DBX2Q6ZNG2 339 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 ZNF441Q8N8Z8 693 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 AIFM2Q9BRQ8 373 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 TPK1Q9H3S4 243 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 MARCH7Q9H992 704 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 FN3KRPQ9HA64 309 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 SDHAF2Q9NX18 166 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 FLRT3Q9NZU0 649 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 SPI1P17947 270 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 CPT2P23786 658 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 IL2RGP31785 369 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 PITPNBP48739 271 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 ACKR1Q16570 336 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 KHDC1LQ5JSQ8 128 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 FAM199XQ6PEV8 388 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 METAP1DQ6UB28 335 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 DCDC5Q6ZRR9 648 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 PGAP1Q75T13 922 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 CSNK2A3Q8NEV1 391 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 PAQR8Q8TEZ7 354 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 RAB1CQ92928 201 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 PRR14Q9BWN1 585 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 ATG5Q9H1Y0 275 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 UBTD1Q9HAC8 227 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 ERVK13-1Q9NX77 482 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 TXNDC12O95881 172 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 MAKP20794 623 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 BMP5P22003 454 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 INSM1Q01101 510 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 ZNF791Q3KP31 576 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 CEACAM19Q7Z692 300 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 OR4D11Q8NGI4 311 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 TBC1D15Q8TC07 691 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 ZFP3Q96NJ6 502 aa7.71□□□□□ -1.18
PDLIM5-201ENST00000317968 PRSS37A4D1T9 235 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 TNFSF11O14788 317 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 SGCEO43556 437 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 UCHL1P09936 223 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 MRPS10P82664 201 aaKnown RBP7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 DGAT2L6Q6ZPD8 337 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 FAM57BQ71RH2 274 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 OR10G3Q8NGC4 313 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 EXOGQ9Y2C4 368 aaKnown RBP7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 OR2W5A6NFC9 320 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 NXPH2O95156 264 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 F13BP05160 661 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 PTBP1P26599 531 aaKnown RBP eCLIP7.7□□□□□ -1.189e-7■■■■□ 21.6
PDLIM5-201ENST00000317968 RIPPLY1Q0D2K3 151 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 YIF1BQ5BJH7 314 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 XKRXQ6PP77 449 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 COX15Q7KZN9 410 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 NFAM1Q8NET5 270 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 MSI2Q96DH6 328 aaKnown RBP7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 IMMP1LQ96LU5 166 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms