RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 TMEM131Q92545 1883 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 IGLV1-36A0A0B4J1U3 117 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 RNF222A6NCQ9 220 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 RAD1O60671 282 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 GP1BAP07359 652 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 MPZP25189 248 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 PPICP45877 212 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 STARP49675 285 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 LUMP51884 338 aaPredicted RBP17.18■□□□□ 0.34
RTN4-201ENST00000317610 PMPCAQ10713 525 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 VWA2Q5GFL6 755 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 SLC22A18ASQ8N1D0 253 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 BPIFB2Q8N4F0 458 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 BPIFCQ8NFQ6 507 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 OR5T2Q8NGG2 359 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 PTX4Q96A99 478 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 TAS2R3Q9NYW6 316 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 VSX1Q9NZR4 365 aaPredicted RBP17.18■□□□□ 0.34
RTN4-201ENST00000317610 KLK13Q9UKR3 277 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 FBXO4Q9UKT5 387 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 HS3ST3A1Q9Y663 406 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 TRAV36DV7A0A075B6V5 113 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 HLA-DQA2P01906 255 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 SERTAD2Q14140 314 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 PABPC1L2AQ5JQF8 200 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 ACOT7LQ6ZUV0 252 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 OR13H1Q8NG92 308 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 SLC6A7Q99884 636 aa17.18■□□□□ 0.34
RTN4-201ENST00000317610 VRK1Q99986 396 aaPredicted RBP17.18■□□□□ 0.34
RTN4-201ENST00000317610 LOC390937A0A1W2PQ73 354 aa17.17■□□□□ 0.34
RTN4-201ENST00000317610 MEGF11A6BM72 1044 aa17.17■□□□□ 0.34
RTN4-201ENST00000317610 FAM74A7A6NL05 159 aa17.17■□□□□ 0.34
RTN4-201ENST00000317610 RIDAP52758 137 aaKnown RBP17.17■□□□□ 0.34
RTN4-201ENST00000317610 SLC37A1P57057 533 aa17.17■□□□□ 0.34
RTN4-201ENST00000317610 RPL27P61353 136 aaKnown RBP17.17■□□□□ 0.34
RTN4-201ENST00000317610 INSM1Q01101 510 aaPredicted RBP17.17■□□□□ 0.34
RTN4-201ENST00000317610 MC2RQ01718 297 aa17.17■□□□□ 0.34
RTN4-201ENST00000317610 TFF2Q03403 129 aa17.17■□□□□ 0.34
RTN4-201ENST00000317610 MEF2DQ14814 521 aa17.17■□□□□ 0.34
RTN4-201ENST00000317610 FAM74A3Q4VXF1 159 aa17.17■□□□□ 0.34
RTN4-201ENST00000317610 OTPQ5XKR4 325 aa17.17■□□□□ 0.34
RTN4-201ENST00000317610 LIN54Q6MZP7 749 aa17.17■□□□□ 0.34
RTN4-201ENST00000317610 KCTD18Q6PI47 426 aaPredicted RBP17.17■□□□□ 0.34
RTN4-201ENST00000317610 OR2W3Q7Z3T1 314 aa17.17■□□□□ 0.34
RTN4-201ENST00000317610 FAM174AQ8TBP5 190 aa17.17■□□□□ 0.34
RTN4-201ENST00000317610 METTL21AQ8WXB1 218 aa17.17■□□□□ 0.34
RTN4-201ENST00000317610 GAS2L1Q99501 681 aaPredicted RBP17.17■□□□□ 0.34
RTN4-201ENST00000317610 NXF5Q9H1B4 397 aaKnown RBP17.17■□□□□ 0.34
RTN4-201ENST00000317610 COMMD9Q9P000 198 aa17.17■□□□□ 0.34
RTN4-201ENST00000317610 CPAMD8Q8IZJ3 1885 aa17.17■□□□□ 0.34
RTN4-201ENST00000317610 OR14I1A6ND48 311 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 C17orf105B2RV13 164 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 SRSF10O75494 262 aaKnown RBP17.16■□□□□ 0.34
RTN4-201ENST00000317610 IL2RAP01589 272 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 SPARCP09486 303 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 ZBTB25P24278 435 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 HHEXQ03014 270 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 ZNF117Q03924 483 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 C1orf100Q5SVJ3 147 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 PDSS1Q5T2R2 415 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 PHF19Q5T6S3 580 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 UQCC3Q6UW78 93 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 SLC25A42Q86VD7 318 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 LYPD6Q86Y78 171 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 MARC2Q969Z3 335 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 ZBTB8AQ96BR9 441 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 ZNF75AQ96N20 296 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 NKX6-2Q9C056 277 aaPredicted RBP17.16■□□□□ 0.34
RTN4-201ENST00000317610 CGGBP1Q9UFW8 167 aaPredicted RBP17.16■□□□□ 0.34
RTN4-201ENST00000317610 GTF2A1LQ9UNN4 478 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 VSIG4Q9Y279 399 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 NOP16Q9Y3C1 178 aaKnown RBP17.16■□□□□ 0.34
RTN4-201ENST00000317610 C11orf98E9PRG8 122 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 NUDT21O43809 227 aaKnown RBP17.16■□□□□ 0.34
RTN4-201ENST00000317610 FNTBP49356 437 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 PPIAP62937 165 aaKnown RBP17.16■□□□□ 0.34
RTN4-201ENST00000317610 DEFA5Q01523 94 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 ACKR1Q16570 336 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 SGCBQ16585 318 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 MOGAT2Q3SYC2 334 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 C1QL3Q5VWW1 255 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 MAMDC2Q7Z304 686 aaPredicted RBP17.16■□□□□ 0.34
RTN4-201ENST00000317610 FAM160A2Q8N612 972 aaPredicted RBP17.16■□□□□ 0.34
RTN4-201ENST00000317610 ZNF321PQ8N8H1 164 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 SLC25A44Q96H78 314 aaPredicted RBP17.16■□□□□ 0.34
RTN4-201ENST00000317610 ZNF285Q96NJ3 590 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 PTDSS2Q9BVG9 487 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 RTN4RQ9BZR6 473 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 FAM117AQ9C073 453 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 PIGMQ9H3S5 423 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 RHBDD3Q9Y3P4 386 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 LRP12Q9Y561 859 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 CACNA1CQ13936 2221 aa17.16■□□□□ 0.34
RTN4-201ENST00000317610 DISC1C4P0D8 188 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 SIGLEC5O15389 551 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 OR6A2O95222 327 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 MT-ATP6P00846 226 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 HLA-AP01891 365 aaKnown RBP17.15■□□□□ 0.34
RTN4-201ENST00000317610 ZNF28P17035 718 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 CXCR1P25024 350 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms