RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 NMNAT1Q9HAN9 279 aaPredicted RBP10.86□□□□□ -0.67
CKS2-201ENST00000314355 ZNF446Q9NWS9 450 aa10.86□□□□□ -0.67
CKS2-201ENST00000314355 MYEF2Q9P2K5 600 aaKnown RBP10.86□□□□□ -0.67
CKS2-201ENST00000314355 ENPP4Q9Y6X5 453 aa10.86□□□□□ -0.67
CKS2-201ENST00000314355 YLPM1P49750 1951 aaKnown RBP10.85□□□□□ -0.67
CKS2-201ENST00000314355 IGHV1-69-2A0A0G2JMI3 117 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 CLDN25C9JDP6 229 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 NME4O00746 187 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 TCF21O43680 179 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 TNFSF4P23510 183 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 PRDX6P30041 224 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 RPS6KA3P51812 740 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 ERVS71-1P61550 626 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 PPP1CBP62140 327 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 TSTQ16762 297 aaKnown RBP10.85□□□□□ -0.67
CKS2-201ENST00000314355 GPR139Q6DWJ6 353 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 ACSM5Q6NUN0 579 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 TBPL2Q6SJ96 375 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 PAQR4Q8N4S7 273 aaPredicted RBP10.85□□□□□ -0.67
CKS2-201ENST00000314355 RFLNBQ8N5W9 214 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 OR13C2Q8NGS9 318 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 CLDND2Q8NHS1 167 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 SLC25A40Q8TBP6 338 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 C4orf45Q96LM5 186 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 FAM107BQ9H098 131 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 OCEL1Q9H607 264 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 TREM2Q9NZC2 230 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 ZDHHC8Q9ULC8 765 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 SNX13Q9Y5W8 968 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 ZANQ9Y493 2812 aa10.85□□□□□ -0.67
CKS2-201ENST00000314355 H3BSA7 217 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 SPRY3O43610 288 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 TIMM8AO60220 97 aaPredicted RBP10.84□□□□□ -0.67
CKS2-201ENST00000314355 KHDRBS3O75525 346 aaKnown RBP10.84□□□□□ -0.67
CKS2-201ENST00000314355 ABHD16AO95870 558 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 MSMBP08118 114 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 IGFBP1P08833 259 aaPredicted RBP10.84□□□□□ -0.67
CKS2-201ENST00000314355 COX5BP10606 129 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 NCK1P16333 377 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 IL2RGP31785 369 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 IFNGR2P38484 337 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 GPR4P46093 362 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 CENPAP49450 140 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 MVKQ03426 396 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 GLO1Q04760 184 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 SPATA46Q5T0L3 261 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 MBNL2Q5VZF2 373 aaKnown RBP10.84□□□□□ -0.67
CKS2-201ENST00000314355 FAHD2BQ6P2I3 314 aaPredicted RBP10.84□□□□□ -0.67
CKS2-201ENST00000314355 DNM1P34Q6PK57 102 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 USP51Q70EK9 711 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 LRRC75AQ8NAA5 344 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 NPEPL1Q8NDH3 523 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 KLF14Q8TD94 323 aaPredicted RBP10.84□□□□□ -0.67
CKS2-201ENST00000314355 CCL17Q92583 94 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 NABP1Q96AH0 204 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 TMEM186Q96B77 213 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 NMD3Q96D46 503 aaKnown RBP10.84□□□□□ -0.67
CKS2-201ENST00000314355 FAHD2AQ96GK7 314 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 C1orf159Q96HA4 380 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 FAM46AQ96IP4 442 aaKnown RBP10.84□□□□□ -0.67
CKS2-201ENST00000314355 SOX7Q9BT81 388 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 OR2J1Q9GZK6 312 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 POLE4Q9NR33 117 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 HIF1ANQ9NWT6 349 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 NDE1Q9NXR1 346 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 EGFL7Q9UHF1 273 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 TMCC3Q9ULS5 477 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 POLR1DQ9Y2S0 133 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 UGT2A1Q9Y4X1 527 aa10.84□□□□□ -0.67
CKS2-201ENST00000314355 IGKV1D-43A0A0B4J1Z2 117 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 TRAV20A0A0B4J274 112 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 A0A1W2PRQ8 180 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 PRSS37A4D1T9 235 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 FFAR1O14842 300 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 SURF4O15260 269 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 SGCEO43556 437 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 SLC16A7O60669 478 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 GAAP10253 952 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 TNFRSF1AP19438 455 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 CRABP1P29762 137 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 SDHAP31040 664 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 HTR5AP47898 357 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 MXRA7P84157 204 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 DGCR6Q14129 220 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 ZNF774Q6NX45 483 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 PGM2L1Q6PCE3 622 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 RINLQ6ZS11 566 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 MEX3DQ86XN8 651 aaKnown RBP10.83□□□□□ -0.68
CKS2-201ENST00000314355 PHC2Q8IXK0 858 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 FAM156AQ8NDB6 213 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 OR5L1Q8NGL2 311 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 YIPF5Q969M3 257 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 MARS2Q96GW9 593 aaKnown RBP10.83□□□□□ -0.68
CKS2-201ENST00000314355 Q96M85 177 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 LPAR2Q9HBW0 351 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 MAN2C1Q9NTJ4 1040 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 DCAF13Q9NV06 445 aaKnown RBP10.83□□□□□ -0.68
CKS2-201ENST00000314355 PLEK2Q9NYT0 353 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 ABCD2Q9UBJ2 740 aa10.83□□□□□ -0.68
CKS2-201ENST00000314355 PCDHB10Q9UN67 800 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms