RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 M0QYG6 137 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 NUPL2O15504 423 aaKnown RBP12.47□□□□□ -0.41
MKS1-201ENST00000313863 SCGNO76038 276 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 HLA-AP01891 365 aaKnown RBP12.47□□□□□ -0.41
MKS1-201ENST00000313863 GP1BAP07359 652 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 SPARCP09486 303 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 GLULP15104 373 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 MAOAP21397 527 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 ACHEP22303 614 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 ADAM8P78325 824 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 PMPCAQ10713 525 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 TAF13Q15543 124 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 SGCBQ16585 318 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 PAN3Q58A45 887 aaKnown RBP12.47□□□□□ -0.41
MKS1-201ENST00000313863 PAPD4Q6PIY7 484 aaKnown RBP12.47□□□□□ -0.41
MKS1-201ENST00000313863 LYG2Q86SG7 212 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 SLC25A42Q86VD7 318 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 GALNT16Q8N428 558 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 INO80EQ8NBZ0 244 aaPredicted RBP12.47□□□□□ -0.41
MKS1-201ENST00000313863 THAP6Q8TBB0 222 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 ASB5Q8WWX0 329 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 AMELYQ99218 206 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 ZNF471Q9BX82 626 aaPredicted RBP12.47□□□□□ -0.41
MKS1-201ENST00000313863 TINAGL1Q9GZM7 467 aaPredicted RBP12.47□□□□□ -0.41
MKS1-201ENST00000313863 BARX1Q9HBU1 254 aaPredicted RBP12.47□□□□□ -0.41
MKS1-201ENST00000313863 VSX1Q9NZR4 365 aaPredicted RBP12.47□□□□□ -0.41
MKS1-201ENST00000313863 MSRAQ9UJ68 235 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 HHLA2Q9UM44 414 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 PRELID3BQ9Y3B1 194 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 KIF26BQ2KJY2 2108 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 CACNA1CQ13936 2221 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 ATG2AQ2TAZ0 1938 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 H3BSH0 61 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 HCRTR1O43613 425 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 ZNF735P0CB33 412 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 HOXB1P14653 301 aaPredicted RBP12.47□□□□□ -0.41
MKS1-201ENST00000313863 RORAP35398 523 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 RPS27P42677 84 aaKnown RBP12.47□□□□□ -0.41
MKS1-201ENST00000313863 LUMP51884 338 aaPredicted RBP12.47□□□□□ -0.41
MKS1-201ENST00000313863 HHEXQ03014 270 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 SNTB1Q13884 538 aaKnown RBP12.47□□□□□ -0.41
MKS1-201ENST00000313863 ELOCQ15369 112 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 SCGB2B2Q4G0G5 96 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 RNASE10Q5GAN6 216 aaKnown RBP12.47□□□□□ -0.41
MKS1-201ENST00000313863 PABPC1L2AQ5JQF8 200 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 PDSS1Q5T2R2 415 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 PRAMEF17Q5VTA0 474 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 CBLN3Q6UW01 205 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 FRMD1Q8N878 549 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 BPIFCQ8NFQ6 507 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 MARC2Q969Z3 335 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 TCTN2Q96GX1 697 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 SLC25A44Q96H78 314 aaPredicted RBP12.47□□□□□ -0.41
MKS1-201ENST00000313863 PHB2Q99623 299 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 NPAS1Q99742 590 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 GAREM1Q9H706 876 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 TAS2R4Q9NYW5 299 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 GMEB2Q9UKD1 530 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 SLC22A13Q9Y226 551 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 ZNF175Q9Y473 711 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 CLDN16Q9Y5I7 305 aa12.47□□□□□ -0.41
MKS1-201ENST00000313863 FRG2CA6NGY1 282 aa12.46□□□□□ -0.41
MKS1-201ENST00000313863 C17orf105B2RV13 164 aa12.46□□□□□ -0.41
MKS1-201ENST00000313863 CLPSP04118 112 aa12.46□□□□□ -0.41
MKS1-201ENST00000313863 MST1P26927 711 aa12.46□□□□□ -0.41
MKS1-201ENST00000313863 CRABP1P29762 137 aa12.46□□□□□ -0.41
MKS1-201ENST00000313863 FNTBP49356 437 aa12.46□□□□□ -0.41
MKS1-201ENST00000313863 PPP1CAP62136 330 aa12.46□□□□□ -0.41
MKS1-201ENST00000313863 EIF2B1Q14232 305 aaKnown RBP12.46□□□□□ -0.41
MKS1-201ENST00000313863 C1orf100Q5SVJ3 147 aa12.46□□□□□ -0.41
MKS1-201ENST00000313863 ELP2Q6IA86 826 aa12.46□□□□□ -0.41
MKS1-201ENST00000313863 ZNF704Q6ZNC4 412 aaPredicted RBP12.46□□□□□ -0.41
MKS1-201ENST00000313863 SLC35D2Q76EJ3 337 aa12.46□□□□□ -0.41
MKS1-201ENST00000313863 OR2W3Q7Z3T1 314 aa12.46□□□□□ -0.41
MKS1-201ENST00000313863 TMEM185AQ8NFB2 350 aa12.46□□□□□ -0.41
MKS1-201ENST00000313863 OR13C3Q8NGS6 347 aa12.46□□□□□ -0.41
MKS1-201ENST00000313863 STK35Q8TDR2 534 aa12.46□□□□□ -0.41
MKS1-201ENST00000313863 C8orf44Q96CB5 159 aa12.46□□□□□ -0.41
MKS1-201ENST00000313863 NARS2Q96I59 477 aaKnown RBP12.46□□□□□ -0.41
MKS1-201ENST00000313863 CMKLR1Q99788 373 aa12.46□□□□□ -0.41
MKS1-201ENST00000313863 TXNIPQ9H3M7 391 aa12.46□□□□□ -0.41
MKS1-201ENST00000313863 KCNK15Q9H427 330 aa12.46□□□□□ -0.41
MKS1-201ENST00000313863 NDRG3Q9UGV2 375 aa12.46□□□□□ -0.41
MKS1-201ENST00000313863 PURGQ9UJV8 347 aaKnown RBP12.46□□□□□ -0.41
MKS1-201ENST00000313863 RAB22AQ9UL26 194 aa12.46□□□□□ -0.41
MKS1-201ENST00000313863 PLEKHA6Q9Y2H5 1048 aa12.46□□□□□ -0.41
MKS1-201ENST00000313863 CHD7Q9P2D1 2997 aa12.46□□□□□ -0.42
MKS1-201ENST00000313863 LDLRAD4O15165 306 aa12.46□□□□□ -0.42
MKS1-201ENST00000313863 SLC16A7O60669 478 aa12.46□□□□□ -0.42
MKS1-201ENST00000313863 PLATP00750 562 aa12.46□□□□□ -0.42
MKS1-201ENST00000313863 GP1BBP13224 206 aa12.46□□□□□ -0.42
MKS1-201ENST00000313863 PGCP20142 388 aa12.46□□□□□ -0.42
MKS1-201ENST00000313863 TBPP20226 339 aa12.46□□□□□ -0.42
MKS1-201ENST00000313863 PRKXP51817 358 aa12.46□□□□□ -0.42
MKS1-201ENST00000313863 DCAF7P61962 342 aa12.46□□□□□ -0.42
MKS1-201ENST00000313863 PPIAP62937 165 aaKnown RBP12.46□□□□□ -0.42
MKS1-201ENST00000313863 ERV3-1Q14264 604 aa12.46□□□□□ -0.42
MKS1-201ENST00000313863 KCNAB1Q14722 419 aa12.46□□□□□ -0.42
MKS1-201ENST00000313863 ATRAIDQ6UW56 229 aa12.46□□□□□ -0.42
MKS1-201ENST00000313863 C17orf107Q6ZR85 190 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms