RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 MTCH1Q9NZJ7 389 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 OR14J1Q9UGF5 321 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 OR52A4PA6NMU1 304 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 CBX7O95931 251 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 PDGFBP01127 241 aaPredicted RBP7.51□□□□□ -1.21
VPS41-202ENST00000310301 GABRB1P18505 474 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 TEAD1P28347 426 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 IL2RGP31785 369 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 CSNK1A1P48729 337 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 CCL11P51671 97 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 GRB2P62993 217 aaKnown RBP7.51□□□□□ -1.21
VPS41-202ENST00000310301 H3F3AP84243 136 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 CTU2Q2VPK5 515 aaKnown RBP7.51□□□□□ -1.21
VPS41-202ENST00000310301 SLC36A2Q495M3 483 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 KDM4DQ6B0I6 523 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 ACOT7LQ6ZUV0 252 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 MOB1BQ7L9L4 216 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 PRSS42Q7Z5A4 293 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 PTRH1Q86Y79 214 aaKnown RBP7.51□□□□□ -1.21
VPS41-202ENST00000310301 CNTN4Q8IWV2 1026 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 C19orf47Q8N9M1 422 aaKnown RBP7.51□□□□□ -1.21
VPS41-202ENST00000310301 FAM3DQ96BQ1 224 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 TVP23CQ96ET8 276 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 MBOAT4Q96T53 435 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 ALG12Q9BV10 488 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 C12orf10Q9HB07 376 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 ZNF816-ZNF321PA0A0X1KG74 233 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 C17orf105B2RV13 164 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 F6UZH7 168 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 H7C1C5 153 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 HSPB6O14558 160 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 TPOP07202 933 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 CHRM4P08173 479 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 MAKP20794 623 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 ACKR3P25106 362 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 CARD18P57730 90 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 LCN6P62502 163 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 EEF1A1P68104 462 aaKnown RBP7.51□□□□□ -1.21
VPS41-202ENST00000310301 HES3Q5TGS1 186 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 BTNL8Q6UX41 500 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 Q6ZRG5 221 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 TMEM151BQ8IW70 566 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 ZNF321PQ8N8H1 164 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 SLC24A4Q8NFF2 622 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 PPP1R35Q8TAP8 253 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 CCDC74BQ96LY2 380 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 FAM173AQ9BQD7 235 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 C1orf198Q9H425 327 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 OPA3Q9H6K4 179 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 ZNF586Q9NXT0 402 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 DNAJB11Q9UBS4 358 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 SH3BGRL2Q9UJC5 107 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 PRSS21Q9Y6M0 314 aa7.51□□□□□ -1.21
VPS41-202ENST00000310301 ZP3P21754 424 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 ELAVL4P26378 380 aaKnown RBP7.5□□□□□ -1.21
VPS41-202ENST00000310301 CLDN20P56880 219 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 FAM74A1Q5RGS3 127 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 WBP2NLQ6ICG8 309 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 IL34Q6ZMJ4 242 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 MBOAT2Q6ZWT7 520 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 SYT9Q86SS6 491 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 OR51A4Q8NGJ6 313 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 WWTR1Q9GZV5 400 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 NGBQ9NPG2 151 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 TAS2R5Q9NYW4 299 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 BOKQ9UMX3 212 aaPredicted RBP7.5□□□□□ -1.21
VPS41-202ENST00000310301 PRRC2BQ5JSZ5 2229 aaKnown RBP7.5□□□□□ -1.21
VPS41-202ENST00000310301 TAAR5O14804 337 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 TOX4O94842 621 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 IGFBP1P08833 259 aaPredicted RBP7.5□□□□□ -1.21
VPS41-202ENST00000310301 OR10J4P0C629 311 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 PTAFRP25105 342 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 ARNTP27540 789 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 OR1D5P58170 312 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 DGCR2P98153 550 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 FOXK2Q01167 660 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 PHLDA2Q53GA4 152 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 PLAC9Q5JTB6 97 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 CTSL3PQ5NE16 218 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 TEX261Q6UWH6 196 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 CD300LGQ6UXG3 332 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 RNF113BQ8IZP6 322 aaKnown RBP7.5□□□□□ -1.21
VPS41-202ENST00000310301 ARFGAP1Q8N6T3 406 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 OR52I2Q8NH67 350 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 DYNC2LI1Q8TCX1 351 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 CLCF1Q9UBD9 225 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 U3KQ87 197 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 A0A1B0GTQ1 180 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 GABARAPH6UMI1 98 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 K7ESM1 405 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 SGK494L7N484 410 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 DVL1O14640 695 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 OR7C1O76099 320 aaPredicted RBP7.5□□□□□ -1.21
VPS41-202ENST00000310301 MMP2P08253 660 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 CTRB1P17538 263 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 ACHEP22303 614 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 HNRNPA3P51991 378 aaKnown RBP7.5□□□□□ -1.21
VPS41-202ENST00000310301 DVL1P1P54792 670 aaPredicted RBP7.5□□□□□ -1.21
VPS41-202ENST00000310301 MTCP1P56278 107 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 ALKBH1Q13686 389 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms