RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 FIG4Q92562 907 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 ABTB1Q969K4 478 aaPredicted RBP7.34□□□□□ -1.23
CHD6-201ENST00000309279 SARAFQ96BY9 339 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 MARS2Q96GW9 593 aaKnown RBP7.34□□□□□ -1.23
CHD6-201ENST00000309279 WFDC6Q9BQY6 131 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 BTBD10Q9BSF8 475 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 UGT2B28Q9BY64 529 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 PRDM14Q9GZV8 571 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 HEYLQ9NQ87 328 aaPredicted RBP7.34□□□□□ -1.23
CHD6-201ENST00000309279 ACER3Q9NUN7 267 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 UFSP2Q9NUQ7 469 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 MRPL22Q9NWU5 206 aaKnown RBP7.34□□□□□ -1.23
CHD6-201ENST00000309279 PLEK2Q9NYT0 353 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 PACSIN3Q9UKS6 424 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 SLC5A6Q9Y289 635 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 SLC6A5Q9Y345 797 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 ZNF337Q9Y3M9 751 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 MPDZO75970 2070 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 ATP6V1G2-DDX39BF2Z307 99 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 NPIPA3F8WFD2 350 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 BCKDKO14874 412 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 GYG2O15488 501 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 EFNA2O43921 213 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 TPST2O60704 377 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 SLC19A2O60779 497 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 SNAP29O95721 258 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 LYNP07948 512 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 PLA2G2AP14555 144 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 UQCRBP14927 111 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 ZNF708P17019 499 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 ELK4P28324 431 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 KCNJ3P48549 501 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 IDH2P48735 452 aaKnown RBP7.34□□□□□ -1.24
CHD6-201ENST00000309279 CLDN18P56856 261 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 FOXF1Q12946 379 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 RAB32Q13637 225 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 NRF1Q16656 503 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 GXYLT1Q4G148 440 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 CYBRD1Q53TN4 286 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 EMC4Q5J8M3 183 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 RAET1LQ5VY80 246 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 DGAT2L7PQ6IED9 249 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 ENPP6Q6UWR7 440 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 SLC35D2Q76EJ3 337 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 GRINAQ7Z429 371 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 FAM57AQ8TBR7 257 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 PHF3Q92576 2039 aaKnown RBP7.34□□□□□ -1.24
CHD6-201ENST00000309279 WDYHV1Q96HA8 205 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 RNF145Q96MT1 663 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 SFXN2Q96NB2 322 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 PCNX1Q96RV3 2341 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 ARHGDIGQ99819 225 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 SEC22CQ9BRL7 303 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 POLDIP3Q9BY77 421 aaKnown RBP7.34□□□□□ -1.24
CHD6-201ENST00000309279 DCAF13Q9NV06 445 aaKnown RBP7.34□□□□□ -1.24
CHD6-201ENST00000309279 HAO2Q9NYQ3 351 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 DIMT1Q9UNQ2 313 aaKnown RBP7.34□□□□□ -1.24
CHD6-201ENST00000309279 STARD10Q9Y365 291 aa7.34□□□□□ -1.24
CHD6-201ENST00000309279 ARHGAP21Q5T5U3 1957 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 FASNP49327 2511 aaKnown RBP7.33□□□□□ -1.24
CHD6-201ENST00000309279 DIDO1Q9BTC0 2240 aaKnown RBP7.33□□□□□ -1.24
CHD6-201ENST00000309279 FAM240BA0A1B0GVZ2 78 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 FAM90A7PA6NKC0 464 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 FAM90A22PA8MWA6 464 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 FAM90A12PA8MX19 464 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 FAM90A23PA8MXZ1 464 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 SHISA8B8ZZ34 492 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 PRRG2O14669 202 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 GSC2O15499 205 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 ZNHIT1O43257 154 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 BRI3O95415 125 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 RLN1P04808 185 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 HOXD4P09016 255 aaPredicted RBP7.33□□□□□ -1.24
CHD6-201ENST00000309279 NCK1P16333 377 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 ABOP16442 354 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 ME2P23368 584 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 FKBP2P26885 142 aaKnown RBP7.33□□□□□ -1.24
CHD6-201ENST00000309279 APOBEC1P41238 236 aaKnown RBP7.33□□□□□ -1.24
CHD6-201ENST00000309279 CLDN15P56746 228 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 COPZ1P61923 177 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 CSNK2A1P68400 391 aaPredicted RBP7.33□□□□□ -1.24
CHD6-201ENST00000309279 BNIP2Q12982 314 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 HLXQ14774 488 aaPredicted RBP7.33□□□□□ -1.24
CHD6-201ENST00000309279 PON3Q15166 354 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 ADGRG3Q86Y34 549 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 DOLPP1Q86YN1 238 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 UBQLNLQ8IYU4 475 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 FAM89BQ8N5H3 189 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 LRRC17Q8N6Y2 441 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 CYB561A3Q8NBI2 242 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 CSNK2A3Q8NEV1 391 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 OR6T1Q8NGN1 323 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 ZNF563Q8TA94 476 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 HSD17B8Q92506 261 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 MISP3Q96FF7 219 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 THTPAQ9BU02 230 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 TESQ9UGI8 421 aaKnown RBP7.33□□□□□ -1.24
CHD6-201ENST00000309279 GDF2Q9UK05 429 aaPredicted RBP7.33□□□□□ -1.24
CHD6-201ENST00000309279 ADAM30Q9UKF2 790 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms