RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 A0A1W2PPL8 197 aa16.92■□□□□ 0.3
PDZRN3-202ENST00000308537 C17orf100A8MU93 164 aa16.92■□□□□ 0.3
PDZRN3-202ENST00000308537 NGFP01138 241 aa16.92■□□□□ 0.3
PDZRN3-202ENST00000308537 LCKP06239 509 aa16.92■□□□□ 0.3
PDZRN3-202ENST00000308537 ERCC1P07992 297 aaPredicted RBP16.92■□□□□ 0.3
PDZRN3-202ENST00000308537 SDHAP31040 664 aa16.92■□□□□ 0.3
PDZRN3-202ENST00000308537 MPV17P39210 176 aa16.92■□□□□ 0.3
PDZRN3-202ENST00000308537 RAD52P43351 418 aa16.92■□□□□ 0.3
PDZRN3-202ENST00000308537 MNAT1P51948 309 aa16.92■□□□□ 0.3
PDZRN3-202ENST00000308537 KLF3P57682 345 aaPredicted RBP16.92■□□□□ 0.3
PDZRN3-202ENST00000308537 KRR1Q13601 381 aaKnown RBP16.92■□□□□ 0.3
PDZRN3-202ENST00000308537 KRT72Q14CN4 511 aa16.92■□□□□ 0.3
PDZRN3-202ENST00000308537 OTPQ5XKR4 325 aa16.92■□□□□ 0.3
PDZRN3-202ENST00000308537 RRM2BQ7LG56 351 aa16.92■□□□□ 0.3
PDZRN3-202ENST00000308537 SYT9Q86SS6 491 aa16.92■□□□□ 0.3
PDZRN3-202ENST00000308537 OR1J1Q8NGS3 322 aa16.92■□□□□ 0.3
PDZRN3-202ENST00000308537 NSMCE2Q96MF7 247 aa16.92■□□□□ 0.3
PDZRN3-202ENST00000308537 SYT4Q9H2B2 425 aa16.92■□□□□ 0.3
PDZRN3-202ENST00000308537 IL1RAPQ9NPH3 570 aa16.92■□□□□ 0.3
PDZRN3-202ENST00000308537 NDE1Q9NXR1 346 aa16.92■□□□□ 0.3
PDZRN3-202ENST00000308537 TIMM10BQ9Y5J6 103 aa16.92■□□□□ 0.3
PDZRN3-202ENST00000308537 TANC2Q9HCD6 1990 aa16.91■□□□□ 0.3
PDZRN3-202ENST00000308537 A0A1W2PPW3 197 aa16.91■□□□□ 0.3
PDZRN3-202ENST00000308537 C5orf49A4QMS7 147 aa16.91■□□□□ 0.3
PDZRN3-202ENST00000308537 DCTN6O00399 190 aa16.91■□□□□ 0.3
PDZRN3-202ENST00000308537 WNT9BO14905 357 aa16.91■□□□□ 0.3
PDZRN3-202ENST00000308537 LMX1BO60663 402 aa16.91■□□□□ 0.3
PDZRN3-202ENST00000308537 GMNNO75496 209 aa16.91■□□□□ 0.3
PDZRN3-202ENST00000308537 FAM107AO95990 144 aa16.91■□□□□ 0.3
PDZRN3-202ENST00000308537 ATP6V1B2P21281 511 aa16.91■□□□□ 0.3
PDZRN3-202ENST00000308537 CDKN2AP42771 156 aaKnown RBP16.91■□□□□ 0.3
PDZRN3-202ENST00000308537 MMP15P51511 669 aa16.91■□□□□ 0.3
PDZRN3-202ENST00000308537 MRPS11P82912 194 aaKnown RBP16.91■□□□□ 0.3
PDZRN3-202ENST00000308537 DBPQ10586 325 aaPredicted RBP16.91■□□□□ 0.3
PDZRN3-202ENST00000308537 CHRFAM7AQ494W8 412 aa16.91■□□□□ 0.3
PDZRN3-202ENST00000308537 SPATS1Q496A3 300 aa16.91■□□□□ 0.3
PDZRN3-202ENST00000308537 GPR139Q6DWJ6 353 aa16.91■□□□□ 0.3
PDZRN3-202ENST00000308537 LRMDAQ9H2I8 198 aa16.91■□□□□ 0.3
PDZRN3-202ENST00000308537 KCNN2Q9H2S1 579 aa16.91■□□□□ 0.3
PDZRN3-202ENST00000308537 TCRBV5S2A0A599 114 aa16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 UNC119BA6NIH7 251 aa16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 FAM157CP0CG43 387 aa16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 T-ENOLP0DO92 83 aa16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 ACHEP22303 614 aa16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 CCNOP22674 350 aa16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 SPATA46Q5T0L3 261 aa16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 MBNL2Q5VZF2 373 aaKnown RBP16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 DPY19L2P2Q6ZN68 376 aa16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 CCDC197Q8NCU1 140 aa16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 SLC25A40Q8TBP6 338 aa16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 IPCEF1Q8WWN9 437 aaPredicted RBP16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 C11orf40Q8WZ69 217 aa16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 RDH5Q92781 318 aa16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 SNX18Q96RF0 628 aa16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 WACQ9BTA9 647 aa16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 NUAK2Q9H093 628 aa16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 CHODLQ9H9P2 273 aa16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 HINT3Q9NQE9 182 aaKnown RBP16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 ZNF275Q9NSD4 429 aaPredicted RBP16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 NKIRAS2Q9NYR9 191 aa16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 CDC42EP3Q9UKI2 254 aa16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 IER3IP1Q9Y5U9 82 aa16.9■□□□□ 0.3
PDZRN3-202ENST00000308537 LOC100289279A0A1B0GTE1 492 aa16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 SOCS2O14508 198 aa16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 GADD45GO95257 159 aa16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 MPZL1O95297 269 aa16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 ITGA2P17301 1181 aa16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 FPR3P25089 353 aa16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 MAGEA2P43356 314 aa16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 GSSP48637 474 aa16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 GDI2P50395 445 aaKnown RBP16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 PCBD1P61457 104 aa16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 SPIBQ01892 262 aa16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 NKPD1Q17RQ9 610 aa16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 FAM166AQ6J272 317 aa16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 SMARCD3Q6STE5 483 aa16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 C16orf89Q6UX73 402 aa16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 VASH1Q7L8A9 365 aaPredicted RBP16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 KLF14Q8TD94 323 aaPredicted RBP16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 HPS1Q92902 700 aa16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 TSSK2Q96PF2 358 aa16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 OR2J1Q9GZK6 312 aa16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 OR52D1Q9H346 318 aa16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 POFUT1Q9H488 388 aa16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 SLCO1C1Q9NYB5 712 aa16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 KLHL21Q9UJP4 597 aa16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 COA3Q9Y2R0 106 aaPredicted RBP16.89■□□□□ 0.29
PDZRN3-202ENST00000308537 IGLV1-36A0A0B4J1U3 117 aa16.88■□□□□ 0.29
PDZRN3-202ENST00000308537 C12orf71A8MTZ7 269 aa16.88■□□□□ 0.29
PDZRN3-202ENST00000308537 XKRYO14609 159 aa16.88■□□□□ 0.29
PDZRN3-202ENST00000308537 ARPC3O15145 178 aa16.88■□□□□ 0.29
PDZRN3-202ENST00000308537 SLC16A7O60669 478 aa16.88■□□□□ 0.29
PDZRN3-202ENST00000308537 PPP1R3DO95685 299 aa16.88■□□□□ 0.29
PDZRN3-202ENST00000308537 GPANK1O95872 356 aa16.88■□□□□ 0.29
PDZRN3-202ENST00000308537 FABP3P05413 133 aa16.88■□□□□ 0.29
PDZRN3-202ENST00000308537 GAAP10253 952 aa16.88■□□□□ 0.29
PDZRN3-202ENST00000308537 COX5BP10606 129 aa16.88■□□□□ 0.29
PDZRN3-202ENST00000308537 RRM2P31350 389 aa16.88■□□□□ 0.29
PDZRN3-202ENST00000308537 CHN2P52757 468 aa16.88■□□□□ 0.29
PDZRN3-202ENST00000308537 HMGA2P52926 109 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms