RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 MELKQ14680 651 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 HIST2H3PS2Q5TEC6 136 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 PRAMEF9Q5VWM5 478 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 NAA40Q86UY6 237 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 ARIH2OSQ8N7S6 290 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 C19orf47Q8N9M1 422 aaKnown RBP17.61■□□□□ 0.41
USP48-201ENST00000308271 OR5T1Q8NG75 326 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 ZNF764Q96H86 408 aaPredicted RBP17.61■□□□□ 0.41
USP48-201ENST00000308271 PRAMEF27A3QJZ7 478 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 SULT2B1O00204 365 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 ADAM10O14672 748 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 EFNA3P52797 238 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 SCAND1P57086 179 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 ABI3BPQ7Z7G0 1075 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 MUC20Q8N307 709 aaPredicted RBP17.61■□□□□ 0.41
USP48-201ENST00000308271 BVESQ8NE79 360 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 NANPQ8TBE9 248 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 ARSGQ96EG1 525 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 GABRA1P14867 456 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 EPHA1P21709 976 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 TMEM71Q6P5X7 295 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 FBXL6Q8N531 539 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 NXPE3Q969Y0 559 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 RSPRY1Q96DX4 576 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 PHYHIPLQ96FC7 376 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 TCTN2Q96GX1 697 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 VN1R3Q9BXE9 311 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 PRDM7Q9NQW5 492 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 ANKRD20A5PA0PJZ0 165 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 ZNF705FA8MVS1 300 aaPredicted RBP17.6■□□□□ 0.41
USP48-201ENST00000308271 ZNF705DP0CH99 300 aaPredicted RBP17.6■□□□□ 0.41
USP48-201ENST00000308271 ZNF705BP0CI00 300 aaPredicted RBP17.6■□□□□ 0.41
USP48-201ENST00000308271 F2RL1P55085 397 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 YPEL5P62699 121 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 DMKNQ6E0U4 476 aaPredicted RBP17.6■□□□□ 0.41
USP48-201ENST00000308271 BPIFCQ8NFQ6 507 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 ZNF728P0DKX0 622 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 IL34Q6ZMJ4 242 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 ZG16BQ96DA0 208 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 PCDHB10Q9UN67 800 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 BET1O15155 118 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 B3GALNT1O75752 331 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 CASRP41180 1078 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 PHF19Q5T6S3 580 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 Q6ZRG5 221 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 OR2W3Q7Z3T1 314 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 SLC17A5Q9NRA2 495 aa17.6■□□□□ 0.41
USP48-201ENST00000308271 COA3Q9Y2R0 106 aaPredicted RBP17.6■□□□□ 0.41
USP48-201ENST00000308271 TIMP1P01033 207 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 PTHLHP12272 177 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 TAGLN2P37802 199 aaKnown RBP17.59■□□□□ 0.41
USP48-201ENST00000308271 HNRNPKP61978 463 aaKnown RBP eCLIP17.59■□□□□ 0.41
USP48-201ENST00000308271 SLC17A1Q14916 467 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 FAM78AQ5JUQ0 283 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 MISPQ8IVT2 679 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 DEFB119Q8N690 84 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 RCBTB1Q8NDN9 531 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 OR4D11Q8NGI4 311 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 HGDQ93099 445 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 SPACA1Q9HBV2 294 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 ENY2Q9NPA8 101 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 OR5V1Q9UGF6 321 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 CD300LBA8K4G0 201 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 FCGR2AP12318 317 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 GUCA2AQ02747 115 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 RPL18Q07020 188 aaKnown RBP17.59■□□□□ 0.41
USP48-201ENST00000308271 SKA3Q8IX90 412 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 ZNF687Q8N1G0 1237 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 C20orf141Q9NUB4 165 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 ZNF346Q9UL40 294 aaKnown RBP17.59■□□□□ 0.41
USP48-201ENST00000308271 CNOT4O95628 575 aaKnown RBP17.59■□□□□ 0.41
USP48-201ENST00000308271 HPXP02790 462 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 TK1P04183 234 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 RPA2P15927 270 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 ZNF793Q6ZN11 406 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 TOX2Q96NM4 488 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 KCNJ15Q99712 375 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 FKRPQ9H9S5 495 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 SIGLEC6O43699 453 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 ZFPL1O95159 310 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 C1orf140Q5VVS0 124 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 KIRREL2Q6UWL6 708 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 NHLRC1Q6VVB1 395 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 C20orf24Q9BUV8 137 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 NXF5Q9H1B4 397 aaKnown RBP17.59■□□□□ 0.41
USP48-201ENST00000308271 FGF22Q9HCT0 170 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 UFSP2Q9NUQ7 469 aa17.59■□□□□ 0.41
USP48-201ENST00000308271 SFRP5Q5T4F7 317 aa17.58■□□□□ 0.41
USP48-201ENST00000308271 OR5D18Q8NGL1 313 aa17.58■□□□□ 0.41
USP48-201ENST00000308271 LURAP1Q96LR2 239 aa17.58■□□□□ 0.41
USP48-201ENST00000308271 UBL7Q96S82 380 aaPredicted RBP17.58■□□□□ 0.41
USP48-201ENST00000308271 QSER1Q2KHR3 1735 aa17.58■□□□□ 0.4
USP48-201ENST00000308271 DDAH2O95865 285 aa17.58■□□□□ 0.4
USP48-201ENST00000308271 TM4SF4P48230 202 aa17.58■□□□□ 0.4
USP48-201ENST00000308271 ATP1B3P54709 279 aa17.58■□□□□ 0.4
USP48-201ENST00000308271 LGI3Q8N145 548 aa17.58■□□□□ 0.4
USP48-201ENST00000308271 EXD3Q8N9H8 876 aa17.58■□□□□ 0.4
USP48-201ENST00000308271 FRZBQ92765 325 aa17.58■□□□□ 0.4
USP48-201ENST00000308271 CXorf58Q96LI9 332 aa17.58■□□□□ 0.4
USP48-201ENST00000308271 NUDT22Q9BRQ3 303 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms