RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ASB5Q8WWX0 329 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 FGF14Q92915 247 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 WDR76Q9H967 626 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 DECR2Q9NUI1 292 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 RCC2Q9P258 522 aaKnown RBP4.88□□□□□ -1.63
VPS50-202ENST00000305866 DHCR7Q9UBM7 475 aaKnown RBP4.88□□□□□ -1.63
VPS50-202ENST00000305866 PLCL2Q9UPR0 1127 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 TIMM10BQ9Y5J6 103 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 TMEM82A0PJX8 343 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 OR2AT4A6NND4 320 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 RAB27BO00194 218 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 LMX1BO60663 402 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 DXOO77932 396 aaKnown RBP4.87□□□□□ -1.63
VPS50-202ENST00000305866 RASGRP1O95267 797 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 GPANK1O95872 356 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 FREM3P0C091 2139 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 UBBP0CG47 229 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 UBCP0CG48 685 aaKnown RBP4.87□□□□□ -1.63
VPS50-202ENST00000305866 RCC1P18754 421 aaPredicted RBP4.87□□□□□ -1.63
VPS50-202ENST00000305866 SDHAP31040 664 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 CTHP32929 405 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 ATP1B3P54709 279 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 DCAF7P61962 342 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 RPS27AP62979 156 aaKnown RBP4.87□□□□□ -1.63
VPS50-202ENST00000305866 UBA52P62987 128 aaKnown RBP4.87□□□□□ -1.63
VPS50-202ENST00000305866 FZD2Q14332 565 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 NDUFAF6Q330K2 333 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 GXYLT1Q4G148 440 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 SLC22A6Q4U2R8 563 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 TRIM61Q5EBN2 209 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 PHF19Q5T6S3 580 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 WBP2NLQ6ICG8 309 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 PTCRAQ6ISU1 281 aaPredicted RBP4.87□□□□□ -1.63
VPS50-202ENST00000305866 C5orf46Q6UWT4 87 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 RHOUQ7L0Q8 258 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 CATSPERDQ86XM0 798 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 ODF3L1Q8IXM7 274 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 CDK20Q8IZL9 346 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 BCORP1Q8N888 145 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 ADPRHL1Q8NDY3 354 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 OR52E2Q8NGJ4 325 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 TSSK2Q96PF2 358 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 TGIF2Q9GZN2 237 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 FBXO4Q9UKT5 387 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 MMP17Q9ULZ9 603 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 CLEC4AQ9UMR7 237 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 A0A1W2PR77 199 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 F8W036 122 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 SLC17A2O00624 439 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 GOSR2O14653 212 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 TSPAN2O60636 221 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 RP2O75695 350 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 F12P00748 615 aaPredicted RBP4.87□□□□□ -1.63
VPS50-202ENST00000305866 PAICSP22234 425 aaKnown RBP4.87□□□□□ -1.63
VPS50-202ENST00000305866 GSK3AP49840 483 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 ZNF133P52736 654 aaPredicted RBP4.87□□□□□ -1.63
VPS50-202ENST00000305866 SORDQ00796 357 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 TCEA2Q15560 299 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 C2orf76Q3KRA6 126 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 Q6ZPA2 131 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.87□□□□□ -1.63
VPS50-202ENST00000305866 GABRG1Q8N1C3 465 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 OR1J4Q8NGS1 313 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 OR4C6Q8NH72 309 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 RXFP4Q8TDU9 374 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 ADAMTS17Q8TE56 1095 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 CHIAQ9BZP6 476 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 TINAGL1Q9GZM7 467 aaPredicted RBP4.87□□□□□ -1.63
VPS50-202ENST00000305866 MTIF3Q9H2K0 278 aaKnown RBP4.87□□□□□ -1.63
VPS50-202ENST00000305866 ZNF69Q9UC07 566 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 ZMAT5Q9UDW3 170 aaKnown RBP4.87□□□□□ -1.63
VPS50-202ENST00000305866 IER3IP1Q9Y5U9 82 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 SPACA6W5XKT8 324 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 IGLV3-12A0A075B6K2 115 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 EPOPA6NHQ4 379 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 BCAT2O15382 392 aaPredicted RBP4.87□□□□□ -1.63
VPS50-202ENST00000305866 ICOSLGO75144 302 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 MT-ATP6P00846 226 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 SPP1P10451 314 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 ABOP16442 354 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 BMP7P18075 431 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 SLC6A8P48029 635 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 PRKAG1P54619 331 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 SLC37A1P57057 533 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 KRT33BQ14525 404 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 CD226Q15762 336 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 NKPD1Q17RQ9 610 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 PRRT3Q5FWE3 981 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 KIAA0895LQ68EN5 471 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 LIN54Q6MZP7 749 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 LRRN1Q6UXK5 716 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 ANGPTL5Q86XS5 388 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 OR4N5Q8IXE1 308 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 CSNK1A1LQ8N752 337 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 C19orf47Q8N9M1 422 aaKnown RBP4.87□□□□□ -1.63
VPS50-202ENST00000305866 ADAD2Q8NCV1 583 aaKnown RBP4.87□□□□□ -1.63
VPS50-202ENST00000305866 OR52R1Q8NGF1 315 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 OR5T3Q8NGG3 340 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 OR51L1Q8NGJ5 315 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 OR4K13Q8NH42 304 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms