RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 RAF1P04049 648 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 FABP5Q01469 135 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 TESK1Q15569 626 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 TMEM71Q6P5X7 295 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 SCGB1D1O95968 90 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 DIO1P49895 249 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 CORO6Q6QEF8 472 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 THBS3P49746 956 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 EDDM3BP56851 147 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 OR10A3P58181 314 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 AVPI1Q5T686 147 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 EMG1Q92979 244 aaKnown RBP12.73□□□□□ -0.37
PRKCB-201ENST00000303531 HIF1ANQ9NWT6 349 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 WSB2Q9NYS7 404 aaPredicted RBP12.73□□□□□ -0.37
PRKCB-201ENST00000303531 GIPP09681 153 aaPredicted RBP12.73□□□□□ -0.37
PRKCB-201ENST00000303531 EMC4Q5J8M3 183 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 FAHD1Q6P587 224 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 OR1M1Q8NGA1 313 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 SLAMF6Q96DU3 332 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 RNF170Q96K19 258 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 NIPSNAP3BQ9BS92 247 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 ZNF416Q9BWM5 594 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 YKT6O15498 198 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 CBR1P16152 277 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 OR10K2Q6IF99 312 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 CA13Q8N1Q1 262 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 CCL4L1Q8NHW4 92 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 TAF9BQ9HBM6 251 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 B3GAT1Q9P2W7 334 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 TRPM3Q9HCF6 1732 aaPredicted RBP12.73□□□□□ -0.37
PRKCB-201ENST00000303531 ST6GAL1P15907 406 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 DOC2BQ14184 412 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 SLC25A19Q9HC21 320 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 CACNA1CQ13936 2221 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 KLRC4-KLRK1H3BQV0 150 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 UPK1AO00322 258 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 RAB11AP62491 216 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 BTG2P78543 158 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 VWA2Q5GFL6 755 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 S100A7AQ86SG5 101 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 OR51A4Q8NGJ6 313 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 YIPF6Q96EC8 236 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 LRFN5Q96NI6 719 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 BCL2L10Q9HD36 194 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 NRG2O14511 850 aaPredicted RBP12.72□□□□□ -0.37
PRKCB-201ENST00000303531 RPL18Q07020 188 aaKnown RBP12.72□□□□□ -0.37
PRKCB-201ENST00000303531 OR8B8Q15620 311 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 RPS19BP1Q86WX3 136 aaKnown RBP12.72□□□□□ -0.37
PRKCB-201ENST00000303531 SCPEP1Q9HB40 452 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 B3GALT5Q9Y2C3 310 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 HRH3Q9Y5N1 445 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 A0A0A6YYJ9 748 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 H7C1Q1 480 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 EFSO43281 561 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 ICMTO60725 284 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 EIF4EP06730 217 aaKnown RBP12.72□□□□□ -0.37
PRKCB-201ENST00000303531 GRPP07492 148 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 ALOX5APP20292 161 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 SOX18P35713 384 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 TBC1D28Q2M2D7 210 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 BCO1Q9HAY6 547 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 NGBQ9NPG2 151 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 QPCTLQ9NXS2 382 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 AIPO00170 330 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 QDPRP09417 244 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 ZNF92Q03936 586 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 TMEM178AQ8NBL3 297 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 CCDC74AQ96AQ1 378 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 ASH2LQ9UBL3 628 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 ARRDC5A6NEK1 342 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 ICOSLGO75144 302 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 CAMKMTQ7Z624 323 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 RBMXL3Q8N7X1 1067 aaKnown RBP12.72□□□□□ -0.37
PRKCB-201ENST00000303531 APH1AQ96BI3 265 aa12.72□□□□□ -0.37
PRKCB-201ENST00000303531 GUSBP08236 651 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 RFX2P48378 723 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 DBPQ10586 325 aaPredicted RBP12.71□□□□□ -0.37
PRKCB-201ENST00000303531 ARIH2OSQ8N7S6 290 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 EPHA2P29317 976 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 EDDM3AQ14507 147 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 FAM122BQ7Z309 247 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 ANKRD33Q7Z3H0 272 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 OR6K3Q8NGY3 331 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 RHNO1Q9BSD3 238 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 ISYNA1Q9NPH2 558 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 A0A0B4J203 849 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 HS3ST1O14792 307 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 TSPAN12O95859 305 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 OLFM2O95897 454 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 CTSLP07711 333 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 HLA-DOBP13765 273 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 POU3F3P20264 500 aaPredicted RBP12.71□□□□□ -0.37
PRKCB-201ENST00000303531 KCNRGQ8N5I3 272 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 LAT2Q9GZY6 243 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 GHRLQ9UBU3 117 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 MMP17Q9ULZ9 603 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 PRELID3BQ9Y3B1 194 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 PCYT1BQ9Y5K3 369 aaPredicted RBP12.71□□□□□ -0.37
PRKCB-201ENST00000303531 LOXHD1Q8IVV2 1947 aa12.71□□□□□ -0.37
PRKCB-201ENST00000303531 RAB19A4D1S5 217 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms