RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 Q6ZSV7 163 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 GALNT4Q8N4A0 578 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 FNDC8Q8TC99 324 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 WIPF2Q8TF74 440 aaPredicted RBP5.37□□□□□ -1.55
ITGB1-201ENST00000302278 NPRL2Q8WTW4 380 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 HAVCR1Q96D42 359 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 TBX15Q96SF7 602 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 TMEM109Q9BVC6 243 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 OR2H1Q9GZK4 316 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 OR2J1Q9GZK6 312 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 POLR2J2Q9GZM3 115 aaKnown RBP5.37□□□□□ -1.55
ITGB1-201ENST00000302278 POLR2J3Q9H1A7 115 aaKnown RBP5.37□□□□□ -1.55
ITGB1-201ENST00000302278 ZNF879B4DU55 563 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 G3V4G9 280 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 SDHDO14521 159 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 RFXANKO14593 260 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 THY1P04216 161 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 CCL2P13500 99 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 TNFSF4P23510 183 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 CDH12P55289 794 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 PCBP3P57721 371 aaKnown RBP5.37□□□□□ -1.55
ITGB1-201ENST00000302278 PSG4Q00888 419 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 GLO1Q04760 184 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 HERPUD1Q15011 391 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 KRTAP27-1Q3LI81 207 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 DCDC5Q6ZRR9 648 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 PCYOX1LQ8NBM8 494 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 GEMIN6Q8WXD5 167 aaKnown RBP5.37□□□□□ -1.55
ITGB1-201ENST00000302278 TAF15Q92804 592 aaKnown RBP eCLIP5.37□□□□□ -1.55
ITGB1-201ENST00000302278 ERGIC1Q969X5 290 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 SPATA5L1Q9BVQ7 753 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 SDR39U1Q9NRG7 319 aaPredicted RBP5.37□□□□□ -1.55
ITGB1-201ENST00000302278 NECAP2Q9NVZ3 263 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 CENPVL3A0A0U1RRI6 287 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 ENSAO43768 121 aaKnown RBP5.37□□□□□ -1.55
ITGB1-201ENST00000302278 CRYBA1P05813 215 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 NQO1P15559 274 aaKnown RBP5.37□□□□□ -1.55
ITGB1-201ENST00000302278 NPTX1Q15818 432 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 VAX1Q5SQQ9 334 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 HHATQ5VTY9 493 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 SLC2A7Q6PXP3 512 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 FBXW12Q6X9E4 464 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 ZNF621Q6ZSS3 439 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 ITCHQ96J02 903 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 PLEKHA8Q96JA3 519 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 C4orf45Q96LM5 186 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 NUDT16L1Q9BRJ7 211 aaKnown RBP5.37□□□□□ -1.55
ITGB1-201ENST00000302278 ALG12Q9BV10 488 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 ROPN1BQ9BZX4 212 aaPredicted RBP5.37□□□□□ -1.55
ITGB1-201ENST00000302278 ROPN1Q9HAT0 212 aaPredicted RBP5.37□□□□□ -1.55
ITGB1-201ENST00000302278 CACYBPQ9HB71 228 aaKnown RBP5.37□□□□□ -1.55
ITGB1-201ENST00000302278 TCF7L1Q9HCS4 588 aa5.37□□□□□ -1.55
ITGB1-201ENST00000302278 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.37□□□□□ -1.551e-7■■■■■ 50.8
ITGB1-201ENST00000302278 ISPDA4D126 451 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 HTR3EA5X5Y0 456 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 SURF4O15260 269 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 TRMUO75648 421 aaKnown RBP5.36□□□□□ -1.55
ITGB1-201ENST00000302278 CSF1P09603 554 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 SBK2P0C263 348 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 NR2C1P13056 603 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 IDO1P14902 403 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 GSTM3P21266 225 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 GTF2H4Q92759 462 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 MPP4Q96JB8 637 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 DCLRE1CQ96SD1 692 aaKnown RBP5.36□□□□□ -1.55
ITGB1-201ENST00000302278 RANBP3Q9H6Z4 567 aaPredicted RBP5.36□□□□□ -1.55
ITGB1-201ENST00000302278 RYR2Q92736 4967 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 GPANK1O95872 356 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 ACADSP16219 412 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 ZNF32P17041 273 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 EPHA3P29320 983 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 RBM34P42696 430 aaKnown RBP5.36□□□□□ -1.55
ITGB1-201ENST00000302278 DAP3P51398 398 aaKnown RBP5.36□□□□□ -1.55
ITGB1-201ENST00000302278 HOXC5Q00444 222 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 COL10A1Q03692 680 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 TNFAIP8L3Q5GJ75 292 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 RUSC1-AS1Q66K80 236 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 NXNQ6DKJ4 435 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 CRIP3Q6Q6R5 217 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 AGR3Q8TD06 166 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 TMEM246Q9BRR3 403 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 TRIM15Q9C019 465 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 RMND5AQ9H871 391 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 RNF121Q9H920 327 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 TMEM27Q9HBJ8 222 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 CCNB1IP1Q9NPC3 277 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 NDRG4Q9ULP0 352 aaKnown RBP5.36□□□□□ -1.55
ITGB1-201ENST00000302278 IGHV1-69DA0A0B4J2H0 117 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 TMEM247A6NEH6 219 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 RNASEK-C17orf49H0YIS7 233 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 IGHV1-69P01742 117 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 RAC2P15153 192 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 CRATP43155 626 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 PCBD1P61457 104 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 GNB2P62879 340 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 ENDOGQ14249 297 aaKnown RBP5.36□□□□□ -1.55
ITGB1-201ENST00000302278 WDR25Q64LD2 544 aaPredicted RBP5.36□□□□□ -1.55
ITGB1-201ENST00000302278 REEP3Q6NUK4 255 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 ARL9Q6T311 187 aa5.36□□□□□ -1.55
ITGB1-201ENST00000302278 RANBP3LQ86VV4 465 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms