RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 ROBO4Q8WZ75 1007 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 INTS12Q96CB8 462 aaKnown RBP9.82□□□□□ -0.84
ZNF558-201ENST00000301475 SLC17A5Q9NRA2 495 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 LAMP5Q9UJQ1 280 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 FITM1A5D6W6 292 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 NUDT19A8MXV4 375 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 TRIOO75962 3097 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 S100A6P06703 90 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 PSMB6P28072 239 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 IL13RA1P78552 427 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 MGAT2Q10469 447 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 HNRNPA1L2Q32P51 320 aaKnown RBP9.82□□□□□ -0.84
ZNF558-201ENST00000301475 SLC22A6Q4U2R8 563 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 PRSS41Q7RTY9 318 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 FAM219AQ8IW50 185 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 ADAD2Q8NCV1 583 aaKnown RBP9.82□□□□□ -0.84
ZNF558-201ENST00000301475 NUDCD2Q8WVJ2 157 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 PPP1R14AQ96A00 147 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 RNF126Q9BV68 326 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 CRISPLD2Q9H0B8 497 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 SLC22A7Q9Y694 548 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 KIF26BQ2KJY2 2108 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 TTLL8A6PVC2 850 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 BLOC1S5-TXNDC5H3BN57 136 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 TXNL1O43396 289 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 ZNF432O94892 652 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 VAMP1P23763 118 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 S100PP25815 95 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 PAX6P26367 422 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 CMPK1P30085 196 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 CAV2P51636 162 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 NAAAQ02083 359 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 ISXQ2M1V0 245 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 PRICKLE4Q2TBC4 344 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 JAZF1Q86VZ6 243 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 SUSD6Q92537 303 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 SPSB2Q99619 263 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 PHB2Q99623 299 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 RAB11FIP5Q9BXF6 653 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 SEC61A2Q9H9S3 476 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 SMCO4Q9NRQ5 59 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 CGGBP1Q9UFW8 167 aaPredicted RBP9.81□□□□□ -0.84
ZNF558-201ENST00000301475 PCOLCE2Q9UKZ9 415 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 SLC22A13Q9Y226 551 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 MRPS2Q9Y399 296 aaKnown RBP9.81□□□□□ -0.84
ZNF558-201ENST00000301475 TRANK1O15050 2925 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 IGKV1D-42A0A075B6H8 117 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 A0A087WUJ7 227 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 A0A087WV62 115 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 TRBV6-7A0A0A0MS04 114 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 WIPF3A6NGB9 483 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 CLN5O75503 358 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 OR8U8P0C7N1 319 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 RD3LP0DJH9 198 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 ALOX5APP20292 161 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 CPT2P23786 658 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 PMPCAQ10713 525 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 ELAVL3Q14576 367 aaKnown RBP9.81□□□□□ -0.84
ZNF558-201ENST00000301475 DHCR24Q15392 516 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 PNLIPRP3Q17RR3 467 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 DRAM2Q6UX65 266 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 DGAT2L6Q6ZPD8 337 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 GPX7Q96SL4 187 aaPredicted RBP9.81□□□□□ -0.84
ZNF558-201ENST00000301475 LMAN2LQ9H0V9 348 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 FN3KRPQ9HA64 309 aa9.81□□□□□ -0.84
ZNF558-201ENST00000301475 PRMT8Q9NR22 394 aaPredicted RBP9.81□□□□□ -0.84
ZNF558-201ENST00000301475 MRPS18BQ9Y676 258 aaKnown RBP9.81□□□□□ -0.84
ZNF558-201ENST00000301475 C13orf42A0A1B0GVH6 325 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 FAM157AC9JC47 383 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 PRAMEF26H0Y7S4 382 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 AGPAT2O15120 278 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 HTR3BO95264 441 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 AGAP20933 346 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 SERPINF1P36955 418 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 LPAR6P43657 344 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 SLC25A1P53007 311 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 OR52W1Q6IF63 320 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 FBXO46Q6PJ61 603 aaPredicted RBP9.8□□□□□ -0.84
ZNF558-201ENST00000301475 DHRS11Q6UWP2 260 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 ABHD13Q7L211 337 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 SPRED2Q7Z698 418 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 GVQW1Q8N7I0 195 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 C15orf54Q8N8G6 183 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 KREMEN2Q8NCW0 462 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 ARL5BQ96KC2 179 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 NECAB3Q96P71 396 aaPredicted RBP9.8□□□□□ -0.84
ZNF558-201ENST00000301475 LRRC3BQ96PB8 259 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 DCBLD2Q96PD2 775 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 MICU1Q9BPX6 476 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 PAPOLGQ9BWT3 736 aaKnown RBP9.8□□□□□ -0.84
ZNF558-201ENST00000301475 METTL1Q9UBP6 276 aaKnown RBP9.8□□□□□ -0.84
ZNF558-201ENST00000301475 KCNG2Q9UJ96 466 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 MUC22E2RYF6 1773 aaPredicted RBP9.8□□□□□ -0.84
ZNF558-201ENST00000301475 C5orf51A6NDU8 294 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 RNASEK-C17orf49H0YIS7 233 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 NKX2-2O95096 273 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 TIMP1P01033 207 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 F13BP05160 661 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 PRF1P14222 555 aa9.8□□□□□ -0.84
ZNF558-201ENST00000301475 RCC1P18754 421 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms