RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 RPL22L1Q6P5R6 122 aaKnown RBP13.06□□□□□ -0.32
CDT1-201ENST00000301019 REC114Q7Z4M0 266 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 TMEM150AQ86TG1 271 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 ZNF227Q86WZ6 799 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 JAGN1Q8N5M9 183 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 CSNK1A1LQ8N752 337 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 RAB40AQ8WXH6 277 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 ADAD1Q96M93 576 aaKnown RBP13.06□□□□□ -0.32
CDT1-201ENST00000301019 WFIKKN1Q96NZ8 548 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 MED17Q9NVC6 651 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 PARPBPQ9NWS1 579 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 ICKQ9UPZ9 632 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 RFNGQ9Y644 331 aa13.06□□□□□ -0.32
CDT1-201ENST00000301019 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.05□□□□□ -0.32
CDT1-201ENST00000301019 SLC16A5O15375 505 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 RAMP1O60894 148 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 TSPAN15O95858 294 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 HCKP08631 526 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 RIPPLY1Q0D2K3 151 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 MRPL2Q5T653 305 aaKnown RBP13.05□□□□□ -0.32
CDT1-201ENST00000301019 ARHGAP11AQ6P4F7 1023 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 CLEC1AQ8NC01 280 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 LGR4Q9BXB1 951 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 POTEKPQ9BYX7 375 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 METTL8Q9H825 291 aaKnown RBP13.05□□□□□ -0.32
CDT1-201ENST00000301019 TAF9BQ9HBM6 251 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 SIGLEC7Q9Y286 467 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.05□□□□□ -0.32
CDT1-201ENST00000301019 A0A1W2PR48 441 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 SERTM1A2A2V5 107 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 ZNF860A6NHJ4 632 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 FGF16O43320 207 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 SCAF4O95104 1147 aaKnown RBP13.05□□□□□ -0.32
CDT1-201ENST00000301019 IFNA17P01571 189 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 HEXAP06865 529 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 MIDNQ504T8 468 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 OR13C8Q8NGS7 320 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 MR1Q95460 341 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 PRSS27Q9BQR3 290 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 FBRSQ9HAH7 460 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 ZNF443Q9Y2A4 671 aaPredicted RBP13.05□□□□□ -0.32
CDT1-201ENST00000301019 C4orf51C9J302 202 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 SLC33A1O00400 549 aaPredicted RBP13.05□□□□□ -0.32
CDT1-201ENST00000301019 RCBTB2O95199 551 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 WNT11O96014 354 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 CTSLP07711 333 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 SELPP16109 830 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 TLE1Q04724 770 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 POMZP3Q6PJE2 187 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 MARCH1Q8TCQ1 289 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 CHST5Q9GZS9 411 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 RNF122Q9H9V4 155 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 SLC22A13Q9Y226 551 aa13.05□□□□□ -0.32
CDT1-201ENST00000301019 SLC5A10A0PJK1 596 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 F10P00742 488 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 TRGC2P03986 189 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 HPGDP15428 266 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 NDUFS1P28331 727 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 SNRPD1P62314 119 aaKnown RBP13.04□□□□□ -0.32
CDT1-201ENST00000301019 SPOCK1Q08629 439 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 RTN4RL1Q86UN2 441 aaPredicted RBP13.04□□□□□ -0.32
CDT1-201ENST00000301019 ZCCHC10Q8TBK6 192 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 PHYHIPLQ96FC7 376 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 PHB2Q99623 299 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 CYTL1Q9NRR1 136 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 FRRS1LQ9P0K9 344 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 MED31Q9Y3C7 131 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 OR52A4PA6NMU1 304 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 PRAMEF26H0Y7S4 382 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 IFNL4K9M1U5 179 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 OGG1O15527 345 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 KLK2P20151 261 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 TLX1P31314 330 aaPredicted RBP13.04□□□□□ -0.32
CDT1-201ENST00000301019 NPY4RP50391 375 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 C10orf91Q5T1B1 145 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 UBE3DQ7Z6J8 389 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 DCAF4L2Q8NA75 395 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 MFSD8Q8NHS3 518 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 DTD1Q8TEA8 209 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 PHYHIPQ92561 330 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 TFGQ92734 400 aaPredicted RBP13.04□□□□□ -0.32
CDT1-201ENST00000301019 FAM3DQ96BQ1 224 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 UPB1Q9UBR1 384 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 GDF2Q9UK05 429 aaPredicted RBP13.04□□□□□ -0.32
CDT1-201ENST00000301019 OR51B4Q9Y5P0 310 aa13.04□□□□□ -0.32
CDT1-201ENST00000301019 TGIF2-C20orf24A0A0A6YYL0 155 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 C9orf170A2RU37 121 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 CYB5BO43169 146 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 KLF4O43474 513 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 BRINP1O60477 761 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 STARD6P59095 220 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 AKR1C8PQ5T2L2 129 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 FAM46CQ5VWP2 391 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 TIPARPQ7Z3E1 657 aaKnown RBP13.03□□□□□ -0.32
CDT1-201ENST00000301019 PAQR4Q8N4S7 273 aaPredicted RBP13.03□□□□□ -0.32
CDT1-201ENST00000301019 ALG14Q96F25 216 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 OPA3Q9H6K4 179 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 TUBA4BQ9H853 241 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 POLE3Q9NRF9 147 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 PLA2G2EQ9NZK7 142 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms