RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 SLC18B1Q6NT16 456 aa21.93■■□□□ 1.1
SPTSSA-201ENST00000298130 CD163Q86VB7 1156 aa21.93■■□□□ 1.1
SPTSSA-201ENST00000298130 ACBD4Q8NC06 268 aa21.93■■□□□ 1.1
SPTSSA-201ENST00000298130 SEH1LQ96EE3 360 aa21.93■■□□□ 1.1
SPTSSA-201ENST00000298130 ZNF578Q96N58 590 aaPredicted RBP21.93■■□□□ 1.1
SPTSSA-201ENST00000298130 B3GNT4Q9C0J1 378 aa21.93■■□□□ 1.1
SPTSSA-201ENST00000298130 TRAV36DV7A0A075B6V5 113 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 MFSD2BA6NFX1 497 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 SHISA7A6NL88 538 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 GABRA1P14867 456 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 PPP3CBP16298 524 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 RPL27P61353 136 aaKnown RBP21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 ATXN7L3Q14CW9 347 aaPredicted RBP21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 HLA-DQA1Q5Y7H0 255 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 GSG1LQ6UXU4 331 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 OR6M1Q8NGM8 313 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 KIF25Q9UIL4 384 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 A0A1W2PPC4 97 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 TMEM235A6NFC5 223 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 ZNF432O94892 652 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 RAB3DO95716 219 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 RLN2P04090 185 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 ACHEP22303 614 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 MECP2P51608 486 aaKnown RBP21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 CCINQ13939 588 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 SLC22A6Q4U2R8 563 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 MAMDC2Q7Z304 686 aaPredicted RBP21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 RTN4RL2Q86UN3 420 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 FAM46BQ96A09 425 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 SEC22AQ96IW7 307 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 CYYR1Q96J86 154 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 MFFQ9GZY8 342 aa21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 EXOSC3Q9NQT5 275 aaKnown RBP21.92■■□□□ 1.1
SPTSSA-201ENST00000298130 ABCA7Q8IZY2 2146 aa21.91■■□□□ 1.1
SPTSSA-201ENST00000298130 TMED7-TICAM2A0A0A6YYA0 188 aa21.91■■□□□ 1.1
SPTSSA-201ENST00000298130 IGKV3-11P04433 115 aa21.91■■□□□ 1.1
SPTSSA-201ENST00000298130 GP1BBP13224 206 aa21.91■■□□□ 1.1
SPTSSA-201ENST00000298130 HTR2CP28335 458 aa21.91■■□□□ 1.1
SPTSSA-201ENST00000298130 BLKP51451 505 aa21.91■■□□□ 1.1
SPTSSA-201ENST00000298130 EBPQ15125 230 aaKnown RBP21.91■■□□□ 1.1
SPTSSA-201ENST00000298130 TMEM81Q6P7N7 255 aa21.91■■□□□ 1.1
SPTSSA-201ENST00000298130 LANCL3Q6ZV70 420 aa21.91■■□□□ 1.1
SPTSSA-201ENST00000298130 OR1J2Q8NGS2 313 aa21.91■■□□□ 1.1
SPTSSA-201ENST00000298130 RNF128Q8TEB7 428 aa21.91■■□□□ 1.1
SPTSSA-201ENST00000298130 DUSP15Q9H1R2 295 aaPredicted RBP21.91■■□□□ 1.1
SPTSSA-201ENST00000298130 TMED7Q9Y3B3 224 aa21.91■■□□□ 1.1
SPTSSA-201ENST00000298130 FRG2CA6NGY1 282 aa21.91■■□□□ 1.1
SPTSSA-201ENST00000298130 ARHGDIBP52566 201 aa21.91■■□□□ 1.1
SPTSSA-201ENST00000298130 C15orf40Q8WUR7 153 aa21.91■■□□□ 1.1
SPTSSA-201ENST00000298130 C8orf44Q96CB5 159 aa21.91■■□□□ 1.1
SPTSSA-201ENST00000298130 IGLV1-36A0A0B4J1U3 117 aa21.9■■□□□ 1.1
SPTSSA-201ENST00000298130 A0A1B0GTQ1 180 aa21.9■■□□□ 1.1
SPTSSA-201ENST00000298130 SHISA8B8ZZ34 492 aa21.9■■□□□ 1.1
SPTSSA-201ENST00000298130 HOXD4P09016 255 aaPredicted RBP21.9■■□□□ 1.1
SPTSSA-201ENST00000298130 C4BPBP20851 252 aa21.9■■□□□ 1.1
SPTSSA-201ENST00000298130 NUP62P37198 522 aaPredicted RBP21.9■■□□□ 1.1
SPTSSA-201ENST00000298130 BOLLQ8N9W6 283 aaKnown RBP21.9■■□□□ 1.1
SPTSSA-201ENST00000298130 SLC25A28Q96A46 364 aa21.9■■□□□ 1.1
SPTSSA-201ENST00000298130 CENPMQ9NSP4 180 aa21.9■■□□□ 1.1
SPTSSA-201ENST00000298130 RTTNQ86VV8 2226 aa21.9■■□□□ 1.1
SPTSSA-201ENST00000298130 IGKV1D-43A0A0B4J1Z2 117 aa21.9■■□□□ 1.1
SPTSSA-201ENST00000298130 SLC22A23A1A5C7 686 aa21.9■■□□□ 1.1
SPTSSA-201ENST00000298130 KCNAB3O43448 404 aa21.9■■□□□ 1.1
SPTSSA-201ENST00000298130 OPN1LWP04000 364 aa21.9■■□□□ 1.1
SPTSSA-201ENST00000298130 OR4E1P0C645 316 aa21.9■■□□□ 1.1
SPTSSA-201ENST00000298130 GPX8Q8TED1 209 aa21.9■■□□□ 1.1
SPTSSA-201ENST00000298130 ABCD3P28288 659 aa21.89■■□□□ 1.1
SPTSSA-201ENST00000298130 RIDAP52758 137 aaKnown RBP21.89■■□□□ 1.1
SPTSSA-201ENST00000298130 ZNF660Q6AZW8 331 aaPredicted RBP21.89■■□□□ 1.1
SPTSSA-201ENST00000298130 OR13C3Q8NGS6 347 aa21.89■■□□□ 1.1
SPTSSA-201ENST00000298130 MNTQ99583 582 aa21.89■■□□□ 1.1
SPTSSA-201ENST00000298130 TMPRSS13Q9BYE2 586 aa21.89■■□□□ 1.1
SPTSSA-201ENST00000298130 TAS2R8Q9NYW2 309 aa21.89■■□□□ 1.1
SPTSSA-201ENST00000298130 GPR160Q9UJ42 338 aa21.89■■□□□ 1.1
SPTSSA-201ENST00000298130 A0A1W2PPC1 479 aa21.89■■□□□ 1.09
SPTSSA-201ENST00000298130 TMEM82A0PJX8 343 aa21.89■■□□□ 1.09
SPTSSA-201ENST00000298130 PTGS2P35354 604 aa21.89■■□□□ 1.09
SPTSSA-201ENST00000298130 DMRTC1Q5HYR2 192 aa21.89■■□□□ 1.09
SPTSSA-201ENST00000298130 C1orf140Q5VVS0 124 aa21.89■■□□□ 1.09
SPTSSA-201ENST00000298130 ZNF519Q8TB69 540 aa21.89■■□□□ 1.09
SPTSSA-201ENST00000298130 MED29Q9NX70 200 aa21.89■■□□□ 1.09
SPTSSA-201ENST00000298130 EPHA6Q9UF33 1036 aa21.89■■□□□ 1.09
SPTSSA-201ENST00000298130 P2RY10O00398 339 aa21.88■■□□□ 1.09
SPTSSA-201ENST00000298130 CDK2AP1O14519 115 aa21.88■■□□□ 1.09
SPTSSA-201ENST00000298130 ADAMTS18Q8TE60 1221 aa21.88■■□□□ 1.09
SPTSSA-201ENST00000298130 ARL5BQ96KC2 179 aa21.88■■□□□ 1.09
SPTSSA-201ENST00000298130 MKL2Q9ULH7 1088 aa21.88■■□□□ 1.09
SPTSSA-201ENST00000298130 COL4A2P08572 1712 aa21.88■■□□□ 1.09
SPTSSA-201ENST00000298130 TMEM131Q92545 1883 aa21.88■■□□□ 1.09
SPTSSA-201ENST00000298130 DNASE1L1P49184 302 aa21.88■■□□□ 1.09
SPTSSA-201ENST00000298130 ARRB1P49407 418 aaPredicted RBP21.88■■□□□ 1.09
SPTSSA-201ENST00000298130 OR1D5P58170 312 aa21.88■■□□□ 1.09
SPTSSA-201ENST00000298130 GK2Q14410 553 aaPredicted RBP21.88■■□□□ 1.09
SPTSSA-201ENST00000298130 DCXRQ7Z4W1 244 aa21.88■■□□□ 1.09
SPTSSA-201ENST00000298130 GVQW1Q8N7I0 195 aa21.88■■□□□ 1.09
SPTSSA-201ENST00000298130 SCARB1Q8WTV0 552 aa21.88■■□□□ 1.09
SPTSSA-201ENST00000298130 CCNL2Q96S94 520 aaPredicted RBP21.88■■□□□ 1.09
SPTSSA-201ENST00000298130 MED11Q9P086 117 aa21.88■■□□□ 1.09
SPTSSA-201ENST00000298130 MSRAQ9UJ68 235 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms