RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 CAMK2DQ13557 499 aa12.71□□□□□ -0.37
C9orf3-202ENST00000297979 ALKBH1Q13686 389 aaKnown RBP12.71□□□□□ -0.37
C9orf3-202ENST00000297979 OR1C1Q15619 314 aa12.71□□□□□ -0.37
C9orf3-202ENST00000297979 THEM4Q5T1C6 240 aa12.71□□□□□ -0.37
C9orf3-202ENST00000297979 LINC00696Q6ZRV3 163 aa12.71□□□□□ -0.37
C9orf3-202ENST00000297979 BEND4Q6ZU67 534 aa12.71□□□□□ -0.37
C9orf3-202ENST00000297979 HSD17B8Q92506 261 aa12.71□□□□□ -0.37
C9orf3-202ENST00000297979 OR2B2Q9GZK3 357 aa12.71□□□□□ -0.37
C9orf3-202ENST00000297979 SLCO1C1Q9NYB5 712 aa12.71□□□□□ -0.37
C9orf3-202ENST00000297979 ZNF281Q9Y2X9 895 aa12.71□□□□□ -0.37
C9orf3-202ENST00000297979 A0A0J9YW62 118 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 TNFSF11O14788 317 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 TRAPPC6AO75865 159 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 WDPCPO95876 746 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 M6PRP20645 277 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 EIF2B1Q14232 305 aaKnown RBP12.7□□□□□ -0.38
C9orf3-202ENST00000297979 ATP1A1-AS1Q5TC04 95 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 DDI2Q5TDH0 399 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 TRILQ7L0X0 811 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 TPRA1Q86W33 373 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 SNX29P2Q8IUI4 249 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 OR2M7Q8NG81 312 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 NSMAFQ92636 917 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 SFXN2Q96NB2 322 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 COL25A1Q9BXS0 654 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-202ENST00000297979 KLHL9Q9P2J3 617 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 PTPRBP23467 1997 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 ARL6IP5O75915 188 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 ZFPL1O95159 310 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 LIPCP11150 499 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 CEACAM1P13688 526 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 RGS21Q2M5E4 152 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 YIF1BQ5BJH7 314 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 KCTD18Q6PI47 426 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-202ENST00000297979 IGF2-ASQ6U949 168 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 GLB1L2Q8IW92 636 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 ZNF679Q8IYX0 411 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 SLC39A7Q92504 469 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 OR14A2Q96R54 314 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 ABCB9Q9NP78 766 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 MED12Q93074 2177 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 DNPH1O43598 174 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 VAMP5O95183 116 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 HRGP04196 525 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 UCHL1P09936 223 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 IFITM3Q01628 133 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 ROM1Q03395 351 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 WIPI1Q5MNZ9 446 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-202ENST00000297979 LRRN1Q6UXK5 716 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 NR2C2APQ86WQ0 139 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 GALNT16Q8N428 558 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 OR10Z1Q8NGY1 313 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 ATF6BQ99941 703 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 ABHD6Q9BV23 337 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 MROQ9BYG7 248 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 ELOVL3Q9HB03 270 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 FRRS1LQ9P0K9 344 aa12.7□□□□□ -0.38
C9orf3-202ENST00000297979 FREM3P0C091 2139 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 ZNF726A6NNF4 738 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 LOC110117498-PIK3R3F6TDL0 507 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 UPK1BO75841 260 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 ECDO95905 644 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-202ENST00000297979 NOVA1P51513 510 aaKnown RBP12.69□□□□□ -0.38
C9orf3-202ENST00000297979 SLC17A1Q14916 467 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 POU4F3Q15319 338 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 PCK2Q16822 640 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 TEX30Q5JUR7 227 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 CARD17Q5XLA6 110 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 OR52N5Q8NH56 324 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 OR5AK2Q8NH90 309 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 PHYHIPQ92561 330 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 MAP6Q96JE9 813 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 MIXL1Q9H2W2 232 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 SP140LQ9H930 580 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 PLA2G3Q9NZ20 509 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 B4GALT7Q9UBV7 327 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 KIAA1549Q9HCM3 1950 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 IGHV3-15A0A0B4J1V0 119 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 TRAV1-2A0A0B4J238 106 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 ARGFXA6NJG6 315 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 AQP8O94778 261 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 RAD52P43351 418 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 AGFG1P52594 562 aaKnown RBP12.69□□□□□ -0.38
C9orf3-202ENST00000297979 CLDN17P56750 224 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 CLDN20P56880 219 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 RPP30P78346 268 aaKnown RBP12.69□□□□□ -0.38
C9orf3-202ENST00000297979 UNQ9370/PRO34162Q6UXP9 181 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 VASH2Q86V25 355 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 OR2G2Q8NGZ5 317 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 RGP1Q92546 391 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-202ENST00000297979 UCN2Q96RP3 112 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 HES7Q9BYE0 225 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 SRXN1Q9BYN0 137 aa12.69□□□□□ -0.38
C9orf3-202ENST00000297979 EIF1AYO14602 144 aaKnown RBP12.68□□□□□ -0.38
C9orf3-202ENST00000297979 TLX3O43711 291 aaPredicted RBP12.68□□□□□ -0.38
C9orf3-202ENST00000297979 RRADP55042 308 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 RAC3P60763 192 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 PPP3R1P63098 170 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 HBMQ6B0K9 141 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 MZT2AQ6P582 158 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms