RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 VN1R3Q9BXE9 311 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 DLL4Q9NR61 685 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 C20orf141Q9NUB4 165 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 POMT2Q9UKY4 750 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 A0A0D9SG52 128 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 RPS10-NUDT3A0A1W2PQS6 291 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 IFITM5A6NNB3 132 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 MT-CO3P00414 261 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 GNRHRP30968 328 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 RPS10P46783 165 aaKnown RBP12.25□□□□□ -0.45
HPS3-201ENST00000296051 SELENOPP49908 381 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 MECP2P51608 486 aaKnown RBP12.25□□□□□ -0.45
HPS3-201ENST00000296051 C17orf67Q0P5P2 114 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 TRIP6Q15654 476 aaKnown RBP12.25□□□□□ -0.45
HPS3-201ENST00000296051 CLLU1Q5K131 121 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 LINC00052Q96N35 136 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 C12orf57Q99622 126 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 GPA33Q99795 319 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 LMF2Q9BU23 707 aaKnown RBP12.25□□□□□ -0.45
HPS3-201ENST00000296051 C12orf49Q9H741 205 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 OBP2BQ9NPH6 170 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 KCNJ16Q9NPI9 418 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 MMACHCQ9Y4U1 282 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 CCDC187A0A096LP49 1063 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 SIGLEC5O15389 551 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 ADRB1P08588 477 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 PI3P19957 117 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 TACR3P29371 465 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 PDZK1IP1Q13113 114 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 EXT1Q16394 746 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 FXNQ16595 210 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 WBP2NLQ6ICG8 309 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 GUSBP11Q6P575 273 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 ZNF687Q8N1G0 1237 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 C9orf62Q8N4C0 152 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 OR11H7Q8NGC8 314 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 SLC46A1Q96NT5 459 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 PRRT1Q99946 306 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 SLC5A7Q9GZV3 580 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 ENY2Q9NPA8 101 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 LRFN1Q9P244 771 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 NOSIPQ9Y314 301 aaKnown RBP12.25□□□□□ -0.45
HPS3-201ENST00000296051 TMEM184BQ9Y519 407 aaPredicted RBP12.25□□□□□ -0.45
HPS3-201ENST00000296051 A0A1W2PS29 197 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 TMEM235A6NFC5 223 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 CAPZBP47756 277 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 ALKBH1Q13686 389 aaKnown RBP12.25□□□□□ -0.45
HPS3-201ENST00000296051 Q6ZTK2 550 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 SLC16A14Q7RTX9 510 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 YRDCQ86U90 279 aaKnown RBP12.25□□□□□ -0.45
HPS3-201ENST00000296051 KLHDC8BQ8IXV7 354 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 LRRC18Q8N456 261 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 PRR18Q8N4B5 295 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 CPT1CQ8TCG5 803 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 MARC2Q969Z3 335 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 CFHR5Q9BXR6 569 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 DNTTIP1Q9H147 329 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 MEGF11A6BM72 1044 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 OR6C65A6NJZ3 312 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 NUDT21O43809 227 aaKnown RBP12.25□□□□□ -0.45
HPS3-201ENST00000296051 AKR1C3P42330 323 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 CARD18P57730 90 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 SLC26A5P58743 744 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 CDK5Q00535 292 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 GLYR1Q49A26 553 aaPredicted RBP12.25□□□□□ -0.45
HPS3-201ENST00000296051 OR2AK2Q8NG84 335 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 TCTEX1D2Q8WW35 142 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 TRAF4Q9BUZ4 470 aaPredicted RBP12.25□□□□□ -0.45
HPS3-201ENST00000296051 SLC25A19Q9HC21 320 aa12.25□□□□□ -0.45
HPS3-201ENST00000296051 ARRDC5A6NEK1 342 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 CDC42EP2O14613 210 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 SLC35E2P0CK97 266 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 SLC6A1P30531 599 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 CAMK2DQ13557 499 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 CDK5R1Q15078 307 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 RSU1Q15404 277 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 DUSP18Q8NEJ0 188 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 PRRX2Q99811 253 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 LRRC61Q9BV99 259 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 PUS1Q9Y606 427 aaKnown RBP eCLIP12.24□□□□□ -0.45
HPS3-201ENST00000296051 NID1P14543 1247 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 HOXB3P14651 431 aaPredicted RBP12.24□□□□□ -0.45
HPS3-201ENST00000296051 HOXB9P17482 250 aaPredicted RBP12.24□□□□□ -0.45
HPS3-201ENST00000296051 HTR2CP28335 458 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 PCBP3P57721 371 aaKnown RBP12.24□□□□□ -0.45
HPS3-201ENST00000296051 CYCSP99999 105 aaKnown RBP12.24□□□□□ -0.45
HPS3-201ENST00000296051 TMEM71Q6P5X7 295 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 SMIM4Q8WVI0 70 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 CXorf58Q96LI9 332 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 SULT4A1Q9BR01 284 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 MRI1Q9BV20 369 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 SHANK3Q9BYB0 1731 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 CLDN17P56750 224 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 ZNF674Q2M3X9 581 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 SPACA5Q96QH8 159 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 ICKQ9UPZ9 632 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 OR51B4Q9Y5P0 310 aa12.24□□□□□ -0.45
HPS3-201ENST00000296051 A6NIZ1 184 aa12.23□□□□□ -0.45
HPS3-201ENST00000296051 HSD17B7P56937 341 aa12.23□□□□□ -0.45
HPS3-201ENST00000296051 RAP1BP61224 184 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms