RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 TAAR5O14804 337 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 NSA2O95478 260 aaKnown RBP10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 GNB3P16520 340 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 PSMB5P28074 263 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 LAP3P28838 519 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 EVX1P49640 407 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 CATR1Q13166 79 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 ARTNQ5T4W7 220 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 PRAMEF9Q5VWM5 478 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 HSD17B11Q8NBQ5 300 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 NMNAT3Q96T66 252 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 SRPK3Q9UPE1 567 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 EXO1Q9UQ84 846 aaKnown RBP10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 C17orf112F2Z3M2 114 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 BLVRBP30043 206 aaPredicted RBP10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 FOXK1P85037 733 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 CST9LP1Q5W188 147 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 ACOT7LQ6ZUV0 252 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 TCTE3Q8IZS6 198 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 PRR18Q8N4B5 295 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 GLIPR2Q9H4G4 154 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 EXOSC3Q9NQT5 275 aaKnown RBP10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 SHROOM3Q8TF72 1996 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 TRAPPC2LH3BP13 241 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 M0QYG6 137 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 TAPBPO15533 448 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 SPINT1O43278 529 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 SBK2P0C263 348 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 ZNF728P0DKX0 622 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 OMGP23515 440 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 NFYBP25208 207 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 DPP4P27487 766 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 CLPPQ16740 277 aaPredicted RBP10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 SOWAHCQ53LP3 525 aaPredicted RBP10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 SLC35D2Q76EJ3 337 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 ZNF595Q8IYB9 648 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 KCNRGQ8N5I3 272 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 OR51S1Q8NGJ8 323 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 IL1F10Q8WWZ1 152 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 NEURL2Q9BR09 285 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 RNF167Q9H6Y7 350 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 ATP13A2Q9NQ11 1180 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 COL4A2P08572 1712 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 TRPM6Q9BX84 2022 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 COL4A3Q01955 1670 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 SERINC4A6NH21 518 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 DFFBO76075 338 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 OR7C1O76099 320 aaPredicted RBP10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 HLA-HP01893 362 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 LPLP06858 475 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 GLB1P16278 677 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 APLNRP35414 380 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 REEP5Q00765 189 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 BDH1Q02338 343 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 PLCXD3Q63HM9 321 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 OPN5Q6U736 354 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 LGI3Q8N145 548 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 ANGPTL6Q8NI99 470 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 TGIF2Q9GZN2 237 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 OR52A1Q9UKL2 312 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 CROCCQ5TZA2 2017 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 TCRBV5S2A0A599 114 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 TGOLN2O43493 480 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 GDF9O60383 454 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 GLCEO94923 617 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 CHRM4P08173 479 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 CBR1P16152 277 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 ANXA7P20073 488 aaKnown RBP10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 TSFMP43897 325 aaKnown RBP10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 OR1D4P47884 311 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 SELENBP1Q13228 472 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 IHHQ14623 411 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 GPBAR1Q8TDU6 330 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 PSMF1Q92530 271 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 TM4SF18Q96CE8 201 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 DAZAP1Q96EP5 407 aaKnown RBP10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 COX14Q96I36 57 aa10.82□□□□□ -0.68
SYNGAP1-201ENST00000293748 SNRPGP15A8MWD9 76 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 TRIM77I1YAP6 450 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 FXYD1O00168 92 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 MAGEB4O15481 346 aaPredicted RBP10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 CD1EP15812 388 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 ZNF28P17035 718 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 MSX1P28360 303 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 SRP9P49458 86 aaKnown RBP10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 EXOSC2Q13868 293 aaKnown RBP10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 GLYATL3Q5SZD4 288 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 TMEM207Q6UWW9 146 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 TMEM64Q6YI46 380 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 RIMKLAQ8IXN7 391 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 PRSS35Q8N3Z0 413 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 ZNF439Q8NDP4 499 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 OR1M1Q8NGA1 313 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 TMEM255BQ8WV15 326 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 ASB13Q8WXK3 278 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 ULBP2Q9BZM5 246 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 RANBP2P49792 3224 aaKnown RBP10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 CKAP5Q14008 2032 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 ABCA7Q8IZY2 2146 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 BHLHE40O14503 412 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms