RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 TBPP20226 339 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 RBP2P50120 134 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 SSBP1Q04837 148 aaKnown RBP11.67□□□□□ -0.54
PTCD1-201ENST00000292478 IAH1Q2TAA2 248 aaPredicted RBP11.67□□□□□ -0.54
PTCD1-201ENST00000292478 SCARB1Q8WTV0 552 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 PIGTQ969N2 578 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 SDSLQ96GA7 329 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 TAS2R4Q9NYW5 299 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 ICOSLGO75144 302 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 IGFBP1P08833 259 aaPredicted RBP11.66□□□□□ -0.54
PTCD1-201ENST00000292478 HOXC4P09017 264 aaPredicted RBP11.66□□□□□ -0.54
PTCD1-201ENST00000292478 RAB11AP62491 216 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 PRTGQ2VWP7 1150 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 TIGD3Q6B0B8 471 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 ASTLQ6HA08 431 aaPredicted RBP11.66□□□□□ -0.54
PTCD1-201ENST00000292478 LILRA6Q6PI73 481 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 NANPQ8TBE9 248 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 RTL8AQ9BWD3 113 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 BARHL1Q9BZE3 327 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 PRELID3BQ9Y3B1 194 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 IGHV3-20A0A0C4DH32 117 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 NUDT19A8MXV4 375 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 SPINT2O43291 252 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 DFFBO76075 338 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 BCKDHBP21953 392 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 KCNAB1Q14722 419 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 PLPP5Q8NEB5 264 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 OR5H6Q8NGV6 325 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 OR4A16Q8NH70 328 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 PATE1Q8WXA2 126 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 ASB13Q8WXK3 278 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 THOC3Q96J01 351 aaKnown RBP11.66□□□□□ -0.54
PTCD1-201ENST00000292478 POFUT1Q9H488 388 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 R4GMQ9 66 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 NKX6-3A6NJ46 265 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 PHF1O43189 567 aaPredicted RBP11.66□□□□□ -0.54
PTCD1-201ENST00000292478 SSX4O60224 188 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 SLC2A10O95528 541 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 SNRNP70P08621 437 aaKnown RBP11.66□□□□□ -0.54
PTCD1-201ENST00000292478 QDPRP09417 244 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 ARR3P36575 388 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 PLXDC2Q6UX71 529 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 DVL3Q92997 716 aaPredicted RBP11.66□□□□□ -0.54
PTCD1-201ENST00000292478 KLF13Q9Y2Y9 288 aaPredicted RBP11.66□□□□□ -0.54
PTCD1-201ENST00000292478 EVPLQ92817 2033 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 CHRNB4P30926 498 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 EVX1P49640 407 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 TMEM81Q6P7N7 255 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 OGFOD3Q6PK18 319 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 LHFPL2Q6ZUX7 228 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 SLC35B4Q969S0 331 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 ZPBPQ9BS86 351 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 PLEKHF2Q9H8W4 249 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 CHST2Q9Y4C5 530 aa11.66□□□□□ -0.54
PTCD1-201ENST00000292478 SPTY2D1-AS1A0A0U1RR47 76 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 A0A1B0GTL3 188 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 hCG_1809904A0A1W2PP81 198 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 A0A1W2PPE2 198 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 A0A1W2PR64 198 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 A0A1W2PRV1 198 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 B4GALT3O60512 393 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 IL3RAP26951 378 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 BTG2P78543 158 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 TMEM71Q6P5X7 295 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 FBXL6Q8N531 539 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 ANKRD53Q8N9V6 530 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 BBS1Q8NFJ9 593 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 OR51S1Q8NGJ8 323 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 HIPK2Q9H2X6 1198 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 CGGBP1Q9UFW8 167 aaPredicted RBP11.65□□□□□ -0.54
PTCD1-201ENST00000292478 MED16Q9Y2X0 877 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 TRAV1-2A0A0B4J238 106 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 ESCO2Q56NI9 601 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 PAN3Q58A45 887 aaKnown RBP11.65□□□□□ -0.54
PTCD1-201ENST00000292478 C12orf73Q69YU5 71 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 TMEM200AQ86VY9 491 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 ZNF784Q8NCA9 323 aaPredicted RBP11.65□□□□□ -0.54
PTCD1-201ENST00000292478 FAM71CQ8NEG0 241 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 CCL4L1Q8NHW4 92 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 OR52I2Q8NH67 350 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 FRZBQ92765 325 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 CMTM3Q96MX0 182 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 TAAR5O14804 337 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 POU2F2P09086 479 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 SNCAP37840 140 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 RPS23P62266 143 aaKnown RBP11.65□□□□□ -0.54
PTCD1-201ENST00000292478 SLC17A1Q14916 467 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 ATPAF1Q5TC12 328 aaPredicted RBP11.65□□□□□ -0.54
PTCD1-201ENST00000292478 USP51Q70EK9 711 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 ADGRF3Q8IZF5 1079 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 OR52H1Q8NGJ2 320 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 SEH1LQ96EE3 360 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 SEC22CQ9BRL7 303 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 NTN4Q9HB63 628 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 SLC22A11Q9NSA0 550 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 HAO2Q9NYQ3 351 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 HDGFL3Q9Y3E1 203 aa11.65□□□□□ -0.54
PTCD1-201ENST00000292478 TIMM8BQ9Y5J9 83 aaPredicted RBP11.65□□□□□ -0.54
PTCD1-201ENST00000292478 METTL12A8MUP2 240 aa11.65□□□□□ -0.55
PTCD1-201ENST00000292478 AADACP22760 399 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms