RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 RNFT1Q5M7Z0 435 aa7.52□□□□□ -1.2
PTPDC1-201ENST00000288976 MEDAGQ5VYS4 303 aa7.52□□□□□ -1.2
PTPDC1-201ENST00000288976 SSX6Q7RTT6 188 aa7.52□□□□□ -1.2
PTPDC1-201ENST00000288976 PXKQ7Z7A4 578 aa7.52□□□□□ -1.2
PTPDC1-201ENST00000288976 AP3S1Q92572 193 aa7.52□□□□□ -1.2
PTPDC1-201ENST00000288976 SARAFQ96BY9 339 aa7.52□□□□□ -1.2
PTPDC1-201ENST00000288976 OXGR1Q96P68 337 aa7.52□□□□□ -1.2
PTPDC1-201ENST00000288976 CRLF2Q9HC73 371 aa7.52□□□□□ -1.2
PTPDC1-201ENST00000288976 TAS2R5Q9NYW4 299 aa7.52□□□□□ -1.2
PTPDC1-201ENST00000288976 CRNNQ9UBG3 495 aaPredicted RBP7.52□□□□□ -1.2
PTPDC1-201ENST00000288976 NUFIP1Q9UHK0 495 aaKnown RBP7.52□□□□□ -1.2
PTPDC1-201ENST00000288976 EDARQ9UNE0 448 aa7.52□□□□□ -1.2
PTPDC1-201ENST00000288976 ADAM18Q9Y3Q7 739 aa7.52□□□□□ -1.2
PTPDC1-201ENST00000288976 HEATR5AQ86XA9 2040 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 SMCO3A2RU48 225 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 METTL21EPA6NDL7 271 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 A6NIZ1 184 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 SHISA8B8ZZ34 492 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 RAD51DO75771 328 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 BMP5P22003 454 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 ARL3P36405 182 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 STARP49675 285 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 CXCR4P61073 352 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 RAP1BP61224 184 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 RAP1AP62834 184 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 LSM11P83369 360 aaKnown RBP eCLIP7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 PUDPQ08623 228 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 AAED1Q7RTV5 226 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 TMEM45BQ96B21 275 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 PLA2G12AQ9BZM1 189 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 CHIAQ9BZP6 476 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 OR11A1Q9GZK7 315 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 GLRX2Q9NS18 164 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 KDM4EB2RXH2 506 aaPredicted RBP7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 SURF4O15260 269 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 NPR2P20594 1047 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 ENPP1P22413 925 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 GIPRP48546 466 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 SWI5Q1ZZU3 235 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 FAM122BQ7Z309 247 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 OR8D4Q8NGM9 314 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 WDYHV1Q96HA8 205 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 TAAR6Q96RI8 345 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 SLC25A18Q9H1K4 315 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 SLC6A15Q9H2J7 730 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 OCEL1Q9H607 264 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 EGLN3Q9H6Z9 239 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 INIPQ9NRY2 104 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 SPRR3Q9UBC9 169 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 TRAV27A0A087WT01 109 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 L7N2F9 121 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 M0R082 166 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 CELA3AP09093 270 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 PTAFRP25105 342 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 SDHAP31040 664 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 TDGF1P3P51864 188 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 CARD18P57730 90 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 GNG2P59768 71 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 VAMP2P63027 116 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 RPL18Q07020 188 aaKnown RBP7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 FAPQ12884 760 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 PLEKHN1Q494U1 663 aaPredicted RBP7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 ADGRE4PQ86SQ3 457 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 ELMOD2Q8IZ81 293 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 Q8NA96 180 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 OR8J1Q8NGP2 316 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 ZNF417Q8TAU3 575 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 TMEM163Q8TC26 289 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 SAMD8Q96LT4 415 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 TNFRSF13CQ96RJ3 184 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 ZNF587Q96SQ5 575 aaPredicted RBP7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 TXNIPQ9H3M7 391 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 CMC2Q9NRP2 79 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 PNPLA3Q9NST1 481 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 LIPGQ9Y5X9 500 aa7.52□□□□□ -1.21
PTPDC1-201ENST00000288976 IGKV3D-15A0A087WSY6 115 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 A0A0X1KG70 313 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 K7EM74 188 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 TNFSF11O14788 317 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 CYTIPO60759 359 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 MRPS14O60783 128 aaKnown RBP7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 TPPPO94811 219 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 CD14P08571 375 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 GABRB1P18505 474 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 BCAP31P51572 246 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 ZNF519Q8TB69 540 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 TBC1D15Q8TC07 691 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 FNDC8Q8TC99 324 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 CPT1CQ8TCG5 803 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 SLX1AQ9BQ83 275 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 METTL8Q9H825 291 aaKnown RBP7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 HEATR1Q9H583 2144 aaKnown RBP7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 PIEZO2Q9H5I5 2752 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 AKAP13Q12802 2813 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 A0A0J9YW62 118 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 TEX13CA0A0J9YWL9 993 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 CAMK2DQ13557 499 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 ATXN7L3Q14CW9 347 aaPredicted RBP7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 RNPS1Q15287 305 aaKnown RBP7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 EIF2S3LQ2VIR3 472 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms