RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 RCBTB1Q8NDN9 531 aa11.46□□□□□ -0.58
SLC6A1-201ENST00000287766 TMEM234Q8WY98 164 aa11.46□□□□□ -0.58
SLC6A1-201ENST00000287766 RBMXL1Q96E39 390 aaKnown RBP11.46□□□□□ -0.58
SLC6A1-201ENST00000287766 ST6GAL2Q96JF0 529 aa11.46□□□□□ -0.58
SLC6A1-201ENST00000287766 PLEKHB1Q9UF11 243 aaPredicted RBP11.46□□□□□ -0.58
SLC6A1-201ENST00000287766 NDRG3Q9UGV2 375 aa11.46□□□□□ -0.58
SLC6A1-201ENST00000287766 SCML1Q9UN30 329 aa11.46□□□□□ -0.58
SLC6A1-201ENST00000287766 WASF3Q9UPY6 502 aa11.46□□□□□ -0.58
SLC6A1-201ENST00000287766 TMEM269A0A1B0GVZ9 245 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 TMEM235A6NFC5 223 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 CBX7O95931 251 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 DRD1P21728 446 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 EPHA4P54764 986 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 RAB30Q15771 203 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 CLEC12BQ2HXU8 276 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 WBP2NLQ6ICG8 309 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 TMEM71Q6P5X7 295 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 CCDC71LQ8N9Z2 235 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 FAM174AQ8TBP5 190 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 MRPL38Q96DV4 380 aaKnown RBP11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 SUCNR1Q9BXA5 334 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 IL20Q9NYY1 176 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 KPTNQ9Y664 436 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 PTPRZ1P23471 2315 aaPredicted RBP11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 OR5H14A6NHG9 310 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 ZNF593O00488 134 aaPredicted RBP11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 NME2P1O60361 137 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 PMS2P2O95744 297 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 TLE3Q04726 772 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 SHHQ15465 462 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 KIRREL2Q6UWL6 708 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 ABHD12BQ7Z5M8 362 aaPredicted RBP11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 SFTPA2Q8IWL1 248 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 ETFBKMTQ8IXQ9 262 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 TMEM217Q8N7C4 229 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 PLPP7Q8NBV4 271 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 RNF170Q96K19 258 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 OTOFQ9HC10 1997 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 IGHV3-20A0A0C4DH32 117 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 IDSB3KWA1 339 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 ZNF354AO60765 605 aaPredicted RBP11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 CSF2RBP32927 897 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 C21orf58P58505 322 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 SERTAD2Q14140 314 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 ZNF239Q16600 458 aaKnown RBP11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 Q6ZTK2 550 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 VN1R4Q7Z5H5 301 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 LINC00346Q8IVM7 164 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 C17orf47Q8NEP4 570 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 OR5M8Q8NGP6 311 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 MRGPRX1Q96LB2 322 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 MRPS17Q9Y2R5 130 aaKnown RBP11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 CENPVL1A0A0U1RR11 272 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 CSNK1EP49674 416 aaKnown RBP11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 ARL6IP1Q15041 203 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 HAVCR2Q8TDQ0 301 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 SLC6A18Q96N87 628 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 LMAN1LQ9HAT1 526 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 CHD5Q8TDI0 1954 aa11.45□□□□□ -0.58
SLC6A1-201ENST00000287766 HMGB3O15347 200 aaKnown RBP11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 NUDT21O43809 227 aaKnown RBP11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 EEF1A2Q05639 463 aaKnown RBP11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 ADIRFQ15847 76 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 MEP1BQ16820 701 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 ZNF561Q8N587 486 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 OR52B4Q8NGK2 314 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 OR5D18Q8NGL1 313 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 SLC25A21Q9BQT8 299 aaPredicted RBP11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 MIXL1Q9H2W2 232 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 KCND3Q9UK17 655 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 LOC285556D6RIA3 1793 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 APC2O95996 2303 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 GABARAPH6UMI1 98 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 TRAPPC6AO75865 159 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 TSFMP43897 325 aaKnown RBP11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 FASLGP48023 281 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 NPY4RP50391 375 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 RPL23AP62750 156 aaKnown RBP11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 GLO1Q04760 184 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 ZNF79Q15937 498 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 TSEN54Q7Z6J9 526 aaKnown RBP11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 MARCH3Q86UD3 253 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 CMTM1Q8IZ96 169 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 SFT2D1Q8WV19 159 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 MED18Q9BUE0 208 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 TAF9BQ9HBM6 251 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 B3GAT2Q9NPZ5 323 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 GAR1Q9NY12 217 aaKnown RBP11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 KIF25Q9UIL4 384 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 SVILO95425 2214 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 A0A1W2PPV9 198 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 UMAD1C9J7I0 102 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 GALR3O60755 368 aaPredicted RBP11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 Q499Y3 187 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 PRAMEF8Q5VWM4 474 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 PRAMEF7Q5VXH5 474 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 BAGE3Q86Y29 109 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 BAGE2Q86Y30 109 aa11.44□□□□□ -0.58
SLC6A1-201ENST00000287766 OR4D10Q8NGI6 311 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms