RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 H3BSA7 217 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 EFNA3P52797 238 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 PSMA6P60900 246 aaKnown RBP6.96□□□□□ -1.3
EPHA4-201ENST00000281821 RAB39AQ14964 217 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 HACD4Q5VWC8 232 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 NSUN5P2Q63ZY6 315 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 NLRC3Q7RTR2 1065 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 DPY19L4Q7Z388 723 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 IQCF1Q8N6M8 205 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 FNDC9Q8TBE3 224 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 SLAMF6Q96DU3 332 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 METTL9Q9H1A3 318 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 COA3Q9Y2R0 106 aaPredicted RBP6.96□□□□□ -1.3
EPHA4-201ENST00000281821 BDP1A6H8Y1 2624 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 A0A1B0GTH9 108 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 C2orf72A6NCS6 295 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 J3KTA2 159 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 STARP49675 285 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 IDH3GP51553 393 aaPredicted RBP6.96□□□□□ -1.3
EPHA4-201ENST00000281821 ACTBP60709 375 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 ACTG1P63261 375 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 ARSKQ6UWY0 536 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 BHLHA15Q7RTS1 189 aaPredicted RBP6.96□□□□□ -1.3
EPHA4-201ENST00000281821 ZNF573Q86YE8 665 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 C17orf50Q8WW18 174 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 EXTL1Q92935 676 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 TAAR8Q969N4 342 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 SPSB1Q96BD6 273 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 ADAM18Q9Y3Q7 739 aa6.96□□□□□ -1.3
EPHA4-201ENST00000281821 TBX6O95947 436 aaPredicted RBP6.95□□□□□ -1.3
EPHA4-201ENST00000281821 CHRM2P08172 466 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 MRPL3P09001 348 aaKnown RBP6.95□□□□□ -1.3
EPHA4-201ENST00000281821 ZNF35P13682 527 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 ZNF708P17019 499 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 ZNF182P17025 639 aaPredicted RBP6.95□□□□□ -1.3
EPHA4-201ENST00000281821 BMP5P22003 454 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 TGM4P49221 684 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 ZNF57Q68EA5 555 aaPredicted RBP6.95□□□□□ -1.3
EPHA4-201ENST00000281821 TBPL2Q6SJ96 375 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 RBM45Q8IUH3 476 aaKnown RBP6.95□□□□□ -1.3
EPHA4-201ENST00000281821 OR6M1Q8NGM8 313 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 POM121Q96HA1 1249 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 EGLN3Q9H6Z9 239 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 TP53TG5Q9Y2B4 290 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 MPC1Q9Y5U8 109 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 RIN1Q13671 783 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 MEP1BQ16820 701 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 RNLSQ5VYX0 342 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 ST6GALNAC3Q8NDV1 305 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 RNASE11Q8TAA1 199 aaKnown RBP6.95□□□□□ -1.3
EPHA4-201ENST00000281821 MUL1Q969V5 352 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 DIRAS2Q96HU8 199 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 RAB1BQ9H0U4 201 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 DCSTAMPQ9H295 470 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 SLC6A13Q9NSD5 602 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 ASH2LQ9UBL3 628 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 OR52A1Q9UKL2 312 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 ATP23Q9Y6H3 246 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 PCNX2A6NKB5 2137 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 CYTIPO60759 359 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 IGHG3P01860 377 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 COX6B1P14854 86 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 FAM27BQ5VT28 67 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 WFDC8Q8IUA0 241 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 SEMA6DQ8NFY4 1073 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 RAB40AQ8WXH6 277 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 SORCS2Q96PQ0 1159 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 C12orf49Q9H741 205 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 DECR2Q9NUI1 292 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 ZNF629Q9UEG4 869 aaPredicted RBP6.95□□□□□ -1.3
EPHA4-201ENST00000281821 A3GALT2U3KPV4 340 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 IL1AP01583 271 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 TMEM225BP0DP42 221 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 RAB3BP20337 219 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 TIMP3P35625 211 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 GNG2P59768 71 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 KRT74Q7RTS7 529 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 OR13G1Q8NGZ3 307 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 PFN4Q8NHR9 129 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 CCDC107Q8WV48 283 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 ROBO4Q8WZ75 1007 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 NRTNQ99748 197 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 TSPAN10Q9H1Z9 355 aaPredicted RBP6.95□□□□□ -1.3
EPHA4-201ENST00000281821 GPN1Q9HCN4 374 aaPredicted RBP6.95□□□□□ -1.3
EPHA4-201ENST00000281821 NKX1-2Q9UD57 310 aaPredicted RBP6.95□□□□□ -1.3
EPHA4-201ENST00000281821 OSGIN2Q9Y236 505 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 MRPS18BQ9Y676 258 aaKnown RBP6.95□□□□□ -1.3
EPHA4-201ENST00000281821 A0A0J9YW62 118 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 OR5B21A6NL26 309 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 DKK1O94907 266 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 CDK5Q00535 292 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 ALKBH1Q13686 389 aaKnown RBP6.95□□□□□ -1.3
EPHA4-201ENST00000281821 SLC22A25Q6T423 547 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 IGFN1Q86VF2 1251 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 IZUMO1Q8IYV9 350 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 ENTHD1Q8IYW4 607 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 OR8B4Q96RC9 309 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 CRLF2Q9HC73 371 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 FLRT3Q9NZU0 649 aa6.95□□□□□ -1.3
EPHA4-201ENST00000281821 SCGB2A1O75556 95 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms