RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 FRMD6Q96NE9 622 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 RBFOX1Q9NWB1 397 aaKnown RBP16■□□□□ 0.15
CAPN1-201ENST00000279247 ZNF726A6NNF4 738 aa15.99■□□□□ 0.15
CAPN1-201ENST00000279247 TNFSF11O14788 317 aa15.99■□□□□ 0.15
CAPN1-201ENST00000279247 LIFP15018 202 aa15.99■□□□□ 0.15
CAPN1-201ENST00000279247 MAPK3P27361 379 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-201ENST00000279247 DLSTP36957 453 aa15.99■□□□□ 0.15
CAPN1-201ENST00000279247 STARP49675 285 aa15.99■□□□□ 0.15
CAPN1-201ENST00000279247 GPR176Q14439 515 aa15.99■□□□□ 0.15
CAPN1-201ENST00000279247 DMRTC1Q5HYR2 192 aa15.99■□□□□ 0.15
CAPN1-201ENST00000279247 ASB17Q8WXJ9 295 aa15.99■□□□□ 0.15
CAPN1-201ENST00000279247 TAAR9Q96RI9 348 aa15.99■□□□□ 0.15
CAPN1-201ENST00000279247 PCDHGA5Q9Y5G8 931 aa15.99■□□□□ 0.15
CAPN1-201ENST00000279247 MAP1BP46821 2468 aaKnown RBP15.99■□□□□ 0.15
CAPN1-201ENST00000279247 TRAF3IP2O43734 574 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-201ENST00000279247 WDPCPO95876 746 aa15.99■□□□□ 0.15
CAPN1-201ENST00000279247 ENPP1P22413 925 aa15.99■□□□□ 0.15
CAPN1-201ENST00000279247 PYHIN1Q6K0P9 492 aa15.99■□□□□ 0.15
CAPN1-201ENST00000279247 DBX2Q6ZNG2 339 aa15.99■□□□□ 0.15
CAPN1-201ENST00000279247 OR14L1PQ8NHC6 308 aa15.99■□□□□ 0.15
CAPN1-201ENST00000279247 RPS4Y2Q8TD47 263 aa15.99■□□□□ 0.15
CAPN1-201ENST00000279247 UPRTQ96BW1 309 aa15.99■□□□□ 0.15
CAPN1-201ENST00000279247 OR5V1Q9UGF6 321 aa15.99■□□□□ 0.15
CAPN1-201ENST00000279247 DHDHQ9UQ10 334 aa15.99■□□□□ 0.15
CAPN1-201ENST00000279247 IGLV3-32A0A0A0MS00 114 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 P2RY10O00398 339 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 IGHG1P01857 330 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 P04436 131 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 BLVRAP53004 296 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 TCF15Q12870 199 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 TIGD3Q6B0B8 471 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 LUZP2Q86TE4 346 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 BEST3Q8N1M1 668 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 OR51D1Q8NGF3 324 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 PAQR8Q8TEZ7 354 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 THOC3Q96J01 351 aaKnown RBP15.98■□□□□ 0.15
CAPN1-201ENST00000279247 MNTQ99583 582 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 DCDC2BA2VCK2 349 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 ZNF254O75437 659 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 QDPRP09417 244 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 RFPL3SP0C7P2 107 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 ZNF806P0C7X5 589 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 EIF1P41567 113 aaKnown RBP15.98■□□□□ 0.15
CAPN1-201ENST00000279247 TATDN3Q17R31 274 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 TBRG1Q3YBR2 411 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 SPINK14Q6IE38 97 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 TMPPEQ6ZT21 453 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 TRILQ7L0X0 811 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 COMMD2Q86X83 199 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 TOMM5Q8N4H5 51 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 SLC25A38Q96DW6 304 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 BEX1Q9HBH7 125 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 TMEM9BQ9NQ34 198 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 BOD1L1Q8NFC6 3051 aa15.98■□□□□ 0.15
CAPN1-201ENST00000279247 FRYQ5TBA9 3013 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 TRBV5-5A0A0J9YX44 114 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 ZIC3O60481 467 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 AGFG1P52594 562 aaKnown RBP15.97■□□□□ 0.15
CAPN1-201ENST00000279247 CLDN20P56880 219 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 CD83Q01151 205 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 GALK2Q01415 458 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 SPOCK1Q08629 439 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 SLC25A53Q5H9E4 307 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 ACER2Q5QJU3 275 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 SLC25A44Q96H78 314 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-201ENST00000279247 ANGPTL4Q9BY76 406 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 TAS2R4Q9NYW5 299 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 ASH2LQ9UBL3 628 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 GPR171O14626 319 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 CD1AP06126 327 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 P2RY4P51582 365 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 CBX3Q13185 183 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 SGCAQ16586 387 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.97■□□□□ 0.15
CAPN1-201ENST00000279247 OR51A2Q8NGJ7 313 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 OR6N1Q8NGY5 312 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 ST7LQ8TDW4 575 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 TRIM63Q969Q1 353 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 SLAMF6Q96DU3 332 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 LOXL4Q96JB6 756 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 DOCK7Q96N67 2140 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 ZNF385AQ96PM9 386 aaKnown RBP15.97■□□□□ 0.15
CAPN1-201ENST00000279247 NKIRAS2Q9NYR9 191 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 STMN3Q9NZ72 180 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 CGGBP1Q9UFW8 167 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-201ENST00000279247 PCDHGA9Q9Y5G4 932 aaKnown RBP15.97■□□□□ 0.15
CAPN1-201ENST00000279247 CENPBD1B2RD01 187 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 MT-CO3P00414 261 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 HES3Q5TGS1 186 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 TMEM164Q5U3C3 297 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 ZNF544Q6NX49 715 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 PLXDC2Q6UX71 529 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 CFAP77Q6ZQR2 320 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 LRRTM1Q86UE6 522 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 SIAH3Q8IW03 269 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 OR13C3Q8NGS6 347 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 DACT3Q96B18 629 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-201ENST00000279247 KCNJ15Q99712 375 aa15.97■□□□□ 0.15
CAPN1-201ENST00000279247 RER1O15258 196 aa15.96■□□□□ 0.15
CAPN1-201ENST00000279247 MT-ND4P03905 459 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms