RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 CLEC1AQ8NC01 280 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 OR52E1Q8NGJ3 308 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 GPX8Q8TED1 209 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 TM4SF19Q96DZ7 209 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 CMKLR1Q99788 373 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 FAM117AQ9C073 453 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 SEMA4CQ9C0C4 833 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 SLC7A5P2Q9GIP4 190 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 RAB33BQ9H082 229 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 SLC25A18Q9H1K4 315 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 LYRM4Q9HD34 91 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 BIN3Q9NQY0 253 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 RAXQ9Y2V3 346 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 DMXL2Q8TDJ6 3036 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 WDFY3Q8IZQ1 3526 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 CDRT15L2A8MXV6 281 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 SRPX2O60687 465 aaPredicted RBP9.31□□□□□ -0.92
UPF3B-201ENST00000276201 UPK3AO75631 287 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 NKX2-2O95096 273 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 ABHD16AO95870 558 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 CBX7O95931 251 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 GYPBP06028 91 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 HEXAP06865 529 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 JMJD7P0C870 316 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 ACAA2P42765 397 aaKnown RBP9.31□□□□□ -0.92
UPF3B-201ENST00000276201 GPR143P51810 404 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 HCCSP53701 268 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 NANOS3P60323 173 aaKnown RBP9.31□□□□□ -0.92
UPF3B-201ENST00000276201 ACTBP60709 375 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 RPS15P62841 145 aaKnown RBP9.31□□□□□ -0.92
UPF3B-201ENST00000276201 ACTG1P63261 375 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 SORDQ00796 357 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 LINC01590Q5TEZ4 76 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 FCRLBQ6BAA4 426 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 FDX2Q6P4F2 183 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 SERPINA12Q8IW75 414 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 ZNF433Q8N7K0 673 aaPredicted RBP9.31□□□□□ -0.92
UPF3B-201ENST00000276201 EXD3Q8N9H8 876 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 AGBL5Q8NDL9 886 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 SDR9C7Q8NEX9 313 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 OR4E2Q8NGC2 313 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 OR5M8Q8NGP6 311 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 TNFAIP8L1Q8WVP5 186 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 LCN9Q8WX39 176 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 UQCC2Q9BRT2 126 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 XKR8Q9H6D3 395 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 TAS2R3Q9NYW6 316 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 ACTR10Q9NZ32 417 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 A0A0A6YYH2 397 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 KANTRA0A1W2PQU2 76 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 TMEM218A2RU14 115 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 A6NJ64 397 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 KDM4BO94953 1096 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 SIX6O95475 246 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 APOC1P02654 83 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 PEBP1P30086 187 aaKnown RBP9.31□□□□□ -0.92
UPF3B-201ENST00000276201 TLX1P31314 330 aaPredicted RBP9.31□□□□□ -0.92
UPF3B-201ENST00000276201 PSMB10P40306 273 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 PSMD4P55036 377 aaKnown RBP9.31□□□□□ -0.92
UPF3B-201ENST00000276201 RPS4XP62701 263 aaKnown RBP9.31□□□□□ -0.92
UPF3B-201ENST00000276201 PPIAP62937 165 aaKnown RBP9.31□□□□□ -0.92
UPF3B-201ENST00000276201 BTN3A2P78410 334 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 PAN3Q58A45 887 aaKnown RBP9.31□□□□□ -0.92
UPF3B-201ENST00000276201 ZNF813Q6ZN06 617 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 ZNF550Q7Z398 422 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 FAM220AQ7Z4H9 259 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 VN1R4Q7Z5H5 301 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 ZNF546Q86UE3 836 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 OOSP2Q86WS3 158 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 COX18Q8N8Q8 333 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 OR5AK2Q8NH90 309 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 STOML3Q8TAV4 291 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 LIPHQ8WWY8 451 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 ZDHHC12Q96GR4 267 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 USB1Q9BQ65 265 aaKnown RBP9.31□□□□□ -0.92
UPF3B-201ENST00000276201 SRMSQ9H3Y6 488 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 HRASLS2Q9NWW9 162 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 OCIAD1Q9NX40 245 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 IER3IP1Q9Y5U9 82 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 SLC22A7Q9Y694 548 aa9.31□□□□□ -0.92
UPF3B-201ENST00000276201 EFCAB7A8K855 629 aa9.3□□□□□ -0.92
UPF3B-201ENST00000276201 NUPL2O15504 423 aaKnown RBP9.3□□□□□ -0.92
UPF3B-201ENST00000276201 DOK2O60496 412 aa9.3□□□□□ -0.92
UPF3B-201ENST00000276201 CTAG2O75638 210 aa9.3□□□□□ -0.92
UPF3B-201ENST00000276201 SPDEFO95238 335 aa9.3□□□□□ -0.92
UPF3B-201ENST00000276201 WNT11O96014 354 aa9.3□□□□□ -0.92
UPF3B-201ENST00000276201 NGFRP08138 427 aa9.3□□□□□ -0.92
UPF3B-201ENST00000276201 RFC3P40938 356 aa9.3□□□□□ -0.92
UPF3B-201ENST00000276201 NAA10P41227 235 aaPredicted RBP9.3□□□□□ -0.92
UPF3B-201ENST00000276201 STARP49675 285 aa9.3□□□□□ -0.92
UPF3B-201ENST00000276201 TAS2R19P59542 299 aa9.3□□□□□ -0.92
UPF3B-201ENST00000276201 STK11Q15831 433 aa9.3□□□□□ -0.92
UPF3B-201ENST00000276201 FAAP20Q6NZ36 180 aa9.3□□□□□ -0.92
UPF3B-201ENST00000276201 ULK3Q6PHR2 472 aa9.3□□□□□ -0.92
UPF3B-201ENST00000276201 ACOT7LQ6ZUV0 252 aa9.3□□□□□ -0.92
UPF3B-201ENST00000276201 OR1M1Q8NGA1 313 aa9.3□□□□□ -0.92
UPF3B-201ENST00000276201 OR4K13Q8NH42 304 aa9.3□□□□□ -0.92
UPF3B-201ENST00000276201 SNIP1Q8TAD8 396 aaKnown RBP9.3□□□□□ -0.92
UPF3B-201ENST00000276201 POTEKPQ9BYX7 375 aa9.3□□□□□ -0.92
UPF3B-201ENST00000276201 SAV1Q9H4B6 383 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms