RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 IKZF2Q9UKS7 526 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 RARRES3Q9UL19 164 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 ARID1BQ8NFD5 2236 aaPredicted RBP9.97□□□□□ -0.81
MSH3-201ENST00000265081 TRAV6A0A075B6T7 132 aa9.96□□□□□ -0.81
MSH3-201ENST00000265081 TMEM272A0A1B0GTI8 110 aa9.96□□□□□ -0.81
MSH3-201ENST00000265081 TPOP07202 933 aa9.96□□□□□ -0.81
MSH3-201ENST00000265081 RAB6AP20340 208 aa9.96□□□□□ -0.81
MSH3-201ENST00000265081 EFNB2P52799 333 aa9.96□□□□□ -0.81
MSH3-201ENST00000265081 FOXL2P58012 376 aa9.96□□□□□ -0.81
MSH3-201ENST00000265081 ZFP36L1Q07352 338 aaKnown RBP9.96□□□□□ -0.81
MSH3-201ENST00000265081 MELKQ14680 651 aa9.96□□□□□ -0.81
MSH3-201ENST00000265081 METTL11BQ5VVY1 283 aa9.96□□□□□ -0.81
MSH3-201ENST00000265081 C16orf47Q6ZP98 133 aaPredicted RBP9.96□□□□□ -0.81
MSH3-201ENST00000265081 OR10S1Q8NGN2 331 aa9.96□□□□□ -0.81
MSH3-201ENST00000265081 SLC25A36Q96CQ1 311 aa9.96□□□□□ -0.81
MSH3-201ENST00000265081 GFM1Q96RP9 751 aaKnown RBP9.96□□□□□ -0.81
MSH3-201ENST00000265081 PCSK5Q92824 1860 aa9.96□□□□□ -0.81
MSH3-201ENST00000265081 PHF3Q92576 2039 aaKnown RBP9.96□□□□□ -0.81
MSH3-201ENST00000265081 OR2M5A3KFT3 312 aa9.96□□□□□ -0.82
MSH3-201ENST00000265081 PLGP00747 810 aaPredicted RBP9.96□□□□□ -0.82
MSH3-201ENST00000265081 HPXP02790 462 aa9.96□□□□□ -0.82
MSH3-201ENST00000265081 TRA2AQ13595 282 aaKnown RBP eCLIP9.96□□□□□ -0.82
MSH3-201ENST00000265081 TMPRSS12Q86WS5 348 aa9.96□□□□□ -0.82
MSH3-201ENST00000265081 TAS2R8Q9NYW2 309 aa9.96□□□□□ -0.82
MSH3-201ENST00000265081 PIPOXQ9P0Z9 390 aa9.96□□□□□ -0.82
MSH3-201ENST00000265081 SCP2D1Q9UJQ7 156 aa9.96□□□□□ -0.82
MSH3-201ENST00000265081 ANXA2P2A6NMY6 339 aa9.96□□□□□ -0.82
MSH3-201ENST00000265081 IGLV3-1P01715 115 aa9.96□□□□□ -0.82
MSH3-201ENST00000265081 ANXA2P07355 339 aaKnown RBP9.96□□□□□ -0.82
MSH3-201ENST00000265081 SYPP08247 313 aa9.96□□□□□ -0.82
MSH3-201ENST00000265081 IFNGR1P15260 489 aa9.96□□□□□ -0.82
MSH3-201ENST00000265081 CCL1P22362 96 aa9.96□□□□□ -0.82
MSH3-201ENST00000265081 SLC35D2Q76EJ3 337 aa9.96□□□□□ -0.82
MSH3-201ENST00000265081 OR1J4Q8NGS1 313 aa9.96□□□□□ -0.82
MSH3-201ENST00000265081 SSC4DQ8WTU2 575 aa9.96□□□□□ -0.82
MSH3-201ENST00000265081 NAT6Q93015 286 aa9.96□□□□□ -0.82
MSH3-201ENST00000265081 ZC3H10Q96K80 434 aaKnown RBP9.96□□□□□ -0.82
MSH3-201ENST00000265081 TMPRSS13Q9BYE2 586 aa9.96□□□□□ -0.82
MSH3-201ENST00000265081 ULBP3Q9BZM4 244 aa9.96□□□□□ -0.82
MSH3-201ENST00000265081 SERINC1Q9NRX5 453 aa9.96□□□□□ -0.82
MSH3-201ENST00000265081 NXT1Q9UKK6 140 aaKnown RBP9.96□□□□□ -0.82
MSH3-201ENST00000265081 SLC22A13Q9Y226 551 aa9.96□□□□□ -0.82
MSH3-201ENST00000265081 PCDHGA5Q9Y5G8 931 aa9.96□□□□□ -0.82
MSH3-201ENST00000265081 VCANP13611 3396 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 MYO9BQ13459 2157 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 ANKRD34BA5PLL1 514 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 ZFAND5O76080 213 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 CSF1P09603 554 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 UBCP0CG48 685 aaKnown RBP9.95□□□□□ -0.82
MSH3-201ENST00000265081 EMP2P54851 167 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 SLC25A47Q6Q0C1 308 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 ZNF433Q8N7K0 673 aaPredicted RBP9.95□□□□□ -0.82
MSH3-201ENST00000265081 WDSUB1Q8N9V3 476 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 CLEC1AQ8NC01 280 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 IMMP1LQ96LU5 166 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 SORCS2Q96PQ0 1159 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 ZNF436Q9C0F3 470 aaPredicted RBP9.95□□□□□ -0.82
MSH3-201ENST00000265081 PNRC2Q9NPJ4 139 aaKnown RBP9.95□□□□□ -0.82
MSH3-201ENST00000265081 MED11Q9P086 117 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 CLEC4AQ9UMR7 237 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 IGHV1-45A0A0A0MS14 117 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 SMLR1H3BR10 107 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 ERVH48-1M5A8F1 160 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 AKR7A2O43488 359 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 TRAF3IP2O43734 574 aaPredicted RBP9.95□□□□□ -0.82
MSH3-201ENST00000265081 MPZL1O95297 269 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 NUDT14O95848 222 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 ALDOBP05062 364 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 CCDC85BQ15834 202 aaPredicted RBP9.95□□□□□ -0.82
MSH3-201ENST00000265081 RAB11BQ15907 218 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 HLA-BQ31612 363 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 BTBD16Q32M84 506 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 C2orf76Q3KRA6 126 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 THEM4Q5T1C6 240 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 ZNF813Q6ZN06 617 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 NDUFAF7Q7L592 441 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 MAML2Q8IZL2 1156 aaPredicted RBP9.95□□□□□ -0.82
MSH3-201ENST00000265081 NKAIN3Q8N8D7 197 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 ASB13Q8WXK3 278 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 FAM3DQ96BQ1 224 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 ALX4Q9H161 411 aaPredicted RBP9.95□□□□□ -0.82
MSH3-201ENST00000265081 RPH3AQ9Y2J0 694 aaPredicted RBP9.95□□□□□ -0.82
MSH3-201ENST00000265081 KHDRBS3O75525 346 aaKnown RBP9.95□□□□□ -0.82
MSH3-201ENST00000265081 SNAPC5O75971 98 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 CD74P04233 296 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 DCNP07585 359 aaKnown RBP9.95□□□□□ -0.82
MSH3-201ENST00000265081 SOX2P48431 317 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 POU3F4P49335 361 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 CAPZA1P52907 286 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 PER3P56645 1201 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 H3F3AP84243 136 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 LINC00303Q3SY05 128 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 FAM198BQ6UWH4 519 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 SHISA6Q6ZSJ9 500 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 OR6N1Q8NGY5 312 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 GCDHQ92947 438 aaPredicted RBP9.95□□□□□ -0.82
MSH3-201ENST00000265081 SPACA9Q96E40 222 aaPredicted RBP9.95□□□□□ -0.82
MSH3-201ENST00000265081 SCPEP1Q9HB40 452 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 SDHAF3Q9NRP4 125 aa9.95□□□□□ -0.82
MSH3-201ENST00000265081 C19orf25Q9UFG5 118 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms