RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 SLC22A20A6NK97 555 aa20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 GABRPO00591 440 aa20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 TGM6O95932 706 aa20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 SERPINB10P48595 397 aa20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 ZNF84P51523 738 aa20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 LSM6P62312 80 aaKnown RBP20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 C22orf42Q6IC83 251 aa20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 CORO6Q6QEF8 472 aa20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 TMEM91Q6ZNR0 172 aa20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 GPR137CQ8N3F9 429 aa20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 HSD17B8Q92506 261 aa20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 HTRA1Q92743 480 aa20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 GHSRQ92847 366 aa20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 FAM122AQ96E09 287 aa20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 ZNF837Q96EG3 531 aaPredicted RBP20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 MAP6Q96JE9 813 aa20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 RBM24Q9BX46 236 aaKnown RBP20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 HDHD5Q9BXW7 423 aa20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 MROQ9BYG7 248 aa20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 NELFAQ9H3P2 528 aa20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 B3GAT2Q9NPZ5 323 aa20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 PARPBPQ9NWS1 579 aa20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 LAMA5O15230 3695 aa20.21■□□□□ 0.83
SMARCB1-201ENST00000263121 TRBV2A0A0J9YWF9 115 aa20.2■□□□□ 0.82
SMARCB1-201ENST00000263121 MRPL33O75394 65 aaKnown RBP20.2■□□□□ 0.82
SMARCB1-201ENST00000263121 RGS9O75916 674 aaPredicted RBP20.2■□□□□ 0.82
SMARCB1-201ENST00000263121 RPP14O95059 124 aaKnown RBP20.2■□□□□ 0.82
SMARCB1-201ENST00000263121 YES1P07947 543 aa20.2■□□□□ 0.82
SMARCB1-201ENST00000263121 MSR1P21757 451 aa20.2■□□□□ 0.82
SMARCB1-201ENST00000263121 SH3BGRP55822 239 aaPredicted RBP20.2■□□□□ 0.82
SMARCB1-201ENST00000263121 LINGO2Q7L985 606 aa20.2■□□□□ 0.82
SMARCB1-201ENST00000263121 KRT77Q7Z794 578 aa20.2■□□□□ 0.82
SMARCB1-201ENST00000263121 CPT1CQ8TCG5 803 aa20.2■□□□□ 0.82
SMARCB1-201ENST00000263121 RNF133Q8WVZ7 376 aa20.2■□□□□ 0.82
SMARCB1-201ENST00000263121 LINC00470Q9BZP3 86 aa20.2■□□□□ 0.82
SMARCB1-201ENST00000263121 GP6Q9HCN6 339 aa20.2■□□□□ 0.82
SMARCB1-201ENST00000263121 CLCF1Q9UBD9 225 aa20.2■□□□□ 0.82
SMARCB1-201ENST00000263121 A0A1B0GTH9 108 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 TAF4O00268 1085 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 CRYABP02511 175 aaKnown RBP20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 FCGR2AP12318 317 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 CXADRP78310 365 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 MRPS34P82930 218 aaKnown RBP20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 INSL4Q14641 139 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 FDX2Q6P4F2 183 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 DEGS2Q6QHC5 323 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 SPATC1Q76KD6 591 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 MCEMP1Q8IX19 187 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 MS4A15Q8N5U1 240 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 ALKBH3Q96Q83 286 aaPredicted RBP20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 SLCO5A1Q9H2Y9 848 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 C1orf198Q9H425 327 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 CXorf56Q9H5V9 222 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 CALHM2Q9HA72 323 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 CRLF2Q9HC73 371 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 GDF2Q9UK05 429 aaPredicted RBP20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 CLEC4AQ9UMR7 237 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 POLR1DQ9Y2S0 133 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 LRP12Q9Y561 859 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 OR14I1A6ND48 311 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 CD8B2A6NJW9 211 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 C1QTNF9BB2RNN3 333 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 GPRIN2O60269 458 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 ZNF254O75437 659 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 SC5DO75845 299 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 C1QTNF9P0C862 333 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 CD8BP10966 210 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 GUCA1AP43080 201 aaPredicted RBP20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 RIDAP52758 137 aaKnown RBP20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 ALKBH1Q13686 389 aaKnown RBP20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 SGCAQ16586 387 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 MGAQ8IWI9 3026 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 OR10S1Q8NGN2 331 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 ABHD4Q8TB40 342 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 KCTD7Q96MP8 289 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 FRRS1LQ9P0K9 344 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 GSTK1Q9Y2Q3 226 aa20.19■□□□□ 0.82
SMARCB1-201ENST00000263121 PLA2G5P39877 138 aa20.18■□□□□ 0.82
SMARCB1-201ENST00000263121 OPRL1P41146 370 aa20.18■□□□□ 0.82
SMARCB1-201ENST00000263121 ENDOGQ14249 297 aaKnown RBP20.18■□□□□ 0.82
SMARCB1-201ENST00000263121 DGUOKQ16854 277 aa20.18■□□□□ 0.82
SMARCB1-201ENST00000263121 TSPO2Q5TGU0 170 aa20.18■□□□□ 0.82
SMARCB1-201ENST00000263121 CFAP77Q6ZQR2 320 aa20.18■□□□□ 0.82
SMARCB1-201ENST00000263121 OR2AJ1Q8NGZ0 328 aa20.18■□□□□ 0.82
SMARCB1-201ENST00000263121 OR2G2Q8NGZ5 317 aa20.18■□□□□ 0.82
SMARCB1-201ENST00000263121 SLAMF6Q96DU3 332 aa20.18■□□□□ 0.82
SMARCB1-201ENST00000263121 DACH2Q96NX9 599 aa20.18■□□□□ 0.82
SMARCB1-201ENST00000263121 PDCD1LG2Q9BQ51 273 aa20.18■□□□□ 0.82
SMARCB1-201ENST00000263121 ZNF416Q9BWM5 594 aa20.18■□□□□ 0.82
SMARCB1-201ENST00000263121 SIAEQ9HAT2 523 aa20.18■□□□□ 0.82
SMARCB1-201ENST00000263121 GPR35Q9HC97 309 aa20.18■□□□□ 0.82
SMARCB1-201ENST00000263121 LUZP4Q9P127 313 aa20.18■□□□□ 0.82
SMARCB1-201ENST00000263121 ASH2LQ9UBL3 628 aa20.18■□□□□ 0.82
SMARCB1-201ENST00000263121 PMF1-BGLAPU3KQ54 211 aa20.18■□□□□ 0.82
SMARCB1-201ENST00000263121 OR6C65A6NJZ3 312 aa20.17■□□□□ 0.82
SMARCB1-201ENST00000263121 ZNHIT1O43257 154 aa20.17■□□□□ 0.82
SMARCB1-201ENST00000263121 RPS11P62280 158 aaKnown RBP eCLIP20.17■□□□□ 0.82
SMARCB1-201ENST00000263121 OR7E24Q6IFN5 339 aa20.17■□□□□ 0.82
SMARCB1-201ENST00000263121 GPR137Q96N19 417 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms