RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 GTF3AQ92664 365 aaKnown RBP10.43□□□□□ -0.74
TRAF4-202ENST00000262396 C4orf45Q96LM5 186 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 PRRC1Q96M27 445 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 RBM4Q9BWF3 364 aaKnown RBP10.43□□□□□ -0.74
TRAF4-202ENST00000262396 OR2H1Q9GZK4 316 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 C7orf69Q9H7B7 122 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 VIPAS39Q9H9C1 493 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 RHCGQ9UBD6 479 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 ZDHHC8Q9ULC8 765 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 CAPN7Q9Y6W3 813 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 NPIPB13A6NJU9 1138 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 NPIPB4C9JG80 1138 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 SURF4O15260 269 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 IGHV1-46P01743 117 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 CST2P09228 141 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 SBK2P0C263 348 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 GATA3P23771 443 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 MPV17P39210 176 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 HTR5AP47898 357 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 CENPAP49450 140 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 GZMMP51124 257 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 SELENOWP63302 87 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 LCN2P80188 198 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 ZNF774Q6NX45 483 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 C1orf94Q6P1W5 598 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 SLC25A47Q6Q0C1 308 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 ARPINQ7Z6K5 226 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 CALHM3Q86XJ0 350 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 NRMQ8IXM6 262 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 ZMYND19Q96E35 227 aaPredicted RBP10.42□□□□□ -0.74
TRAF4-202ENST00000262396 POM121L2Q96KW2 1035 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 DDX28Q9NUL7 540 aaKnown RBP10.42□□□□□ -0.74
TRAF4-202ENST00000262396 HIF3AQ9Y2N7 669 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 POLR1DQ9Y2S0 133 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 FAM32AQ9Y421 112 aaKnown RBP10.42□□□□□ -0.74
TRAF4-202ENST00000262396 CACNG2Q9Y698 323 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 SVEP1Q4LDE5 3571 aa10.42□□□□□ -0.74
TRAF4-202ENST00000262396 TRAV27A0A087WT01 109 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 GMNNO75496 209 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 FOXH1O75593 365 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 IGHV2-5P01817 119 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 ADRA2CP18825 462 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 TNFRSF1AP19438 455 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 WNT5AP41221 380 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 LIMS1P48059 325 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 SCRN3Q0VDG4 424 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 ANKDD1AQ495B1 522 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 ARMCX4Q5H9R4 360 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 MTX3Q5HYI7 312 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 MBNL2Q5VZF2 373 aaKnown RBP10.41□□□□□ -0.74
TRAF4-202ENST00000262396 ZNF101Q8IZC7 436 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 KLHL36Q8N4N3 616 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 SPICQ8N5J4 248 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 NPEPL1Q8NDH3 523 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 OR2Z1Q8NG97 314 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 LIPHQ8WWY8 451 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 GEMIN6Q8WXD5 167 aaKnown RBP10.41□□□□□ -0.74
TRAF4-202ENST00000262396 FAM162AQ96A26 154 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 NABP1Q96AH0 204 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 MARS2Q96GW9 593 aaKnown RBP10.41□□□□□ -0.74
TRAF4-202ENST00000262396 COG8Q96MW5 612 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 ZNF583Q96ND8 569 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 WNT5BQ9H1J7 359 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 MSL2Q9HCI7 577 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 KRCC1Q9NPI7 259 aaPredicted RBP10.41□□□□□ -0.74
TRAF4-202ENST00000262396 FGFR1OP2Q9NVK5 253 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 UGT2A1Q9Y4X1 527 aa10.41□□□□□ -0.74
TRAF4-202ENST00000262396 LOC100509620A0A075B734 347 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 IGKV1D-43A0A0B4J1Z2 117 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 ZSCAN5BA6NJL1 495 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 H3BSA7 217 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 H7C1C5 153 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 DOK2O60496 412 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 CFPP27918 469 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 GPR4P46093 362 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 SLC9A3P48764 834 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 ZNF133P52736 654 aaPredicted RBP10.4□□□□□ -0.74
TRAF4-202ENST00000262396 CRYBA2P53672 197 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 HILS1P60008 231 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 LCN6P62502 163 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 IFI44LQ53G44 452 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 RFPL4BQ6ZWI9 263 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 C1QL2Q7Z5L3 287 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 RNF113BQ8IZP6 322 aaKnown RBP10.4□□□□□ -0.74
TRAF4-202ENST00000262396 CLDN22Q8N7P3 220 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 ATG16L2Q8NAA4 619 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 OR13C2Q8NGS9 318 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 C22orf15Q8WYQ4 148 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 RCN3Q96D15 328 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 ZNF570Q96NI8 536 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 SEPHS2Q99611 448 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 SLC6A7Q99884 636 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 MRI1Q9BV20 369 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 EMC7Q9NPA0 242 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 SAR1AQ9NR31 198 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 MAN2C1Q9NTJ4 1040 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 PLEK2Q9NYT0 353 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 AURKCQ9UQB9 309 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 NPTNQ9Y639 398 aa10.4□□□□□ -0.74
TRAF4-202ENST00000262396 CXCR6O00574 342 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms