RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 ARRB1P49407 418 aaPredicted RBP11.71□□□□□ -0.53
SNX1-201ENST00000261889 RAG2P55895 527 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 RPS21P63220 83 aaKnown RBP11.71□□□□□ -0.53
SNX1-201ENST00000261889 BIKQ13323 160 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 CT45A2Q5DJT8 189 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 RPL13AP3Q6NVV1 102 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 SLC16A13Q7RTY0 426 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 NR4A3Q92570 626 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 MMABQ96EY8 250 aaPredicted RBP11.71□□□□□ -0.53
SNX1-201ENST00000261889 ZNF764Q96H86 408 aaPredicted RBP11.71□□□□□ -0.53
SNX1-201ENST00000261889 C20orf24Q9BUV8 137 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 COMMD4Q9H0A8 199 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 TLNRD1Q9H1K6 362 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 CLEC1BQ9P126 229 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 KLF15Q9UIH9 416 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 VSIG4Q9Y279 399 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 F8W036 122 aa11.71□□□□□ -0.54
SNX1-201ENST00000261889 HTR3BO95264 441 aa11.71□□□□□ -0.54
SNX1-201ENST00000261889 AGR2O95994 175 aa11.71□□□□□ -0.54
SNX1-201ENST00000261889 CPN1P15169 458 aa11.71□□□□□ -0.54
SNX1-201ENST00000261889 OR1D4P47884 311 aa11.71□□□□□ -0.54
SNX1-201ENST00000261889 BLOC1S1P78537 153 aa11.71□□□□□ -0.54
SNX1-201ENST00000261889 RAB11BQ15907 218 aa11.71□□□□□ -0.54
SNX1-201ENST00000261889 ELFN2Q5R3F8 820 aa11.71□□□□□ -0.54
SNX1-201ENST00000261889 HACD4Q5VWC8 232 aa11.71□□□□□ -0.54
SNX1-201ENST00000261889 PARM1Q6UWI2 310 aa11.71□□□□□ -0.54
SNX1-201ENST00000261889 OR5D18Q8NGL1 313 aa11.71□□□□□ -0.54
SNX1-201ENST00000261889 GPR148Q8TDV2 347 aa11.71□□□□□ -0.54
SNX1-201ENST00000261889 SLC25A44Q96H78 314 aaPredicted RBP11.71□□□□□ -0.54
SNX1-201ENST00000261889 A0A087WUJ7 227 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 ANOS1P23352 680 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 ADAM8P78325 824 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 TMEM196Q5HYL7 178 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 DPY19L2P2Q6ZN68 376 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 WDFY1Q8IWB7 410 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 YAF2Q8IY57 180 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 CAMKVQ8NCB2 501 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 SEMA6DQ8NFY4 1073 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 SEH1LQ96EE3 360 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 TIMM29Q9BSF4 260 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 SMIM3Q9BZL3 60 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 GSKIPQ9P0R6 139 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 SERINC4A6NH21 518 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 DAOP14920 347 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 C4BPBP20851 252 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 FAUP35544 74 aaKnown RBP11.7□□□□□ -0.54
SNX1-201ENST00000261889 ZP2Q05996 745 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 CLEC1AQ8NC01 280 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 USB1Q9BQ65 265 aaKnown RBP11.7□□□□□ -0.54
SNX1-201ENST00000261889 CRB3Q9BUF7 120 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 RAB11FIP5Q9BXF6 653 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 FOXQ1Q9C009 403 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 SLC6A15Q9H2J7 730 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 PLEKHA1Q9HB21 404 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 COMMD9Q9P000 198 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 SLC5A6Q9Y289 635 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 P2RY10O00398 339 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 CYB5AP00167 134 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 CTLA4P16410 223 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 S1PR1P21453 382 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 LTBRP36941 435 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 SHEQ5VZ18 495 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 JMJD6Q6NYC1 403 aaPredicted RBP11.7□□□□□ -0.54
SNX1-201ENST00000261889 SLC29A4Q7RTT9 530 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 KRT77Q7Z794 578 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 OR4D6Q8NGJ1 314 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 LCORQ96JN0 433 aaPredicted RBP11.7□□□□□ -0.54
SNX1-201ENST00000261889 ZNF426Q9BUY5 554 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 EMC6Q9BV81 110 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 PTGES2Q9H7Z7 377 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 DZANK1Q9NVP4 752 aa11.7□□□□□ -0.54
SNX1-201ENST00000261889 DOCK8Q8NF50 2099 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 RNF222A6NCQ9 220 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 NAP1L6A6NFF2 107 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 MSGN1A6NI15 193 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 ZNF98A6NK75 572 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 ZNF736B4DX44 427 aaPredicted RBP11.69□□□□□ -0.54
SNX1-201ENST00000261889 FGF19O95750 216 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 ABHD16AO95870 558 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 RAB40ALP0C0E4 278 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 RBMS3Q6XE24 437 aaKnown RBP11.69□□□□□ -0.54
SNX1-201ENST00000261889 COMMD2Q86X83 199 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 SLC37A2Q8TED4 501 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 RAB40AQ8WXH6 277 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 TSLPQ969D9 159 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 ZBTB8AQ96BR9 441 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 SLC41A2Q96JW4 573 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 Q9N2J8 555 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 DHCR7Q9UBM7 475 aaKnown RBP11.69□□□□□ -0.54
SNX1-201ENST00000261889 PCDH15Q96QU1 1955 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 TRBV23-1A0A0A0MS06 115 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 H7C2Y5 167 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 GPRIN2O60269 458 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 FBXO24O75426 580 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 NKX2-2O95096 273 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 CD14P08571 375 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 NAT2P11245 290 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 MYF5P13349 255 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 PVALBP20472 110 aaPredicted RBP11.69□□□□□ -0.54
SNX1-201ENST00000261889 CNR1P21554 472 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms