RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 BHLHE40O14503 412 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 IGFBP6P24592 240 aaPredicted RBP12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 SELPLGQ14242 412 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 C6orf89Q6UWU4 347 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 SLC35E1Q96K37 410 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 PLEKHF2Q9H8W4 249 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 ACKR4Q9NPB9 350 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 OCIAD1Q9NX40 245 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 TERTO14746 1132 aaKnown RBP12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 ZNF254O75437 659 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 ALDOCP09972 364 aaKnown RBP12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 CTXN2P0C2S0 81 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 HTR1FP30939 366 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 RSPO4Q2I0M5 234 aaPredicted RBP12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 ZNF679Q8IYX0 411 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 OR51F2Q8NH61 342 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 JAM3Q9BX67 310 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 OCEL1Q9H607 264 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 ZFP64Q9NPA5 681 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 GLTPQ9NZD2 209 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 SERGEFQ9UGK8 458 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 EBF1Q9UH73 591 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 SELENOFO60613 162 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 YIF1AO95070 293 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 CLDN1O95832 211 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 DNASE1P24855 282 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 GIPRP48546 466 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 MLLT11Q13015 90 aaPredicted RBP12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 GLIPR1L1Q6UWM5 242 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 OR14A2Q96R54 314 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 GINS3Q9BRX5 216 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 OR11A1Q9GZK7 315 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 RAB22AQ9UL26 194 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 OSGIN2Q9Y236 505 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 TRGV10A0A0A0MS01 117 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 NCBP2LA6PVI3 153 aaKnown RBP12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 MSTNO14793 375 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 PRAF2O60831 178 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 B4GALT1P15291 398 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 GABRB3P28472 473 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 PHC1P78364 1004 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 NAA40Q86UY6 237 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 AKR1E2Q96JD6 320 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 ARL6Q9H0F7 186 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 HES4Q9HCC6 221 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 SDHAP31040 664 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 SHBQ15464 509 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 ANKRD34AQ69YU3 496 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 CNIH2Q6PI25 160 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 PRSS42Q7Z5A4 293 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 NOXO1Q8NFA2 376 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 OR2Z1Q8NG97 314 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 PHOX2BQ99453 314 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 SSX3Q99909 188 aa12.35□□□□□ -0.43
PDGFRB-201ENST00000261799 SCAF4O95104 1147 aaKnown RBP12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 NRASP01111 189 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 ARRB2P32121 409 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 SLC6A12P48065 614 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 ELFN2Q5R3F8 820 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 KCNIP4Q6PIL6 250 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 NANPQ8TBE9 248 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 SLCO5A1Q9H2Y9 848 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 HBG1P69891 147 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 HBG2P69892 147 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 NFATC3Q12968 1075 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 TPBGQ13641 420 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 C19orf48Q6RUI8 117 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 OR52H1Q8NGJ2 320 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 LRFN5Q96NI6 719 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 MEIKINA0A087WXM9 373 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 E9PI62 339 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 GABRPO00591 440 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 CSN1S1P47710 185 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 ACVR1Q04771 509 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 CRMP1Q14194 572 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 ADPRMQ3LIE5 342 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 TMEM171Q8WVE6 324 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 APOBEC3DQ96AK3 386 aaPredicted RBP12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 HEYLQ9NQ87 328 aaPredicted RBP12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 AMMECR1Q9Y4X0 333 aaPredicted RBP12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 PATE3B3GLJ2 98 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 TSPAN15O95858 294 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 ACKR1Q16570 336 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 PWWP2BQ6NUJ5 590 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 TFAP2EQ6VUC0 442 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 MYEOVQ96EZ4 313 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 MRGPRX3Q96LB0 322 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 KRBA1A5PL33 1030 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 CLN5O75503 358 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 TFPTP0C1Z6 253 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 SHEQ5VZ18 495 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 TMEM65Q6PI78 240 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 ADGRE4PQ86SQ3 457 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 BPIFB2Q8N4F0 458 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 OR2AE1Q8NHA4 323 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 TXN2Q99757 166 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 ACER3Q9NUN7 267 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 ASH2LQ9UBL3 628 aa12.34□□□□□ -0.43
PDGFRB-201ENST00000261799 ZNF705EA8MWA4 302 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms