RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 PTTG1IPP53801 180 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 ZNF90Q03938 601 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 ZMAT1Q5H9K5 638 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 MARC2Q969Z3 335 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 SNCGO76070 127 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 NKX2-1P43699 371 aaPredicted RBP13.1□□□□□ -0.31
CUX2-201ENST00000261726 TEKQ02763 1124 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 VRK3Q8IV63 474 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 ZC3H12DA2A288 527 aaKnown RBP13.1□□□□□ -0.31
CUX2-201ENST00000261726 HCCSP53701 268 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 TMEM123Q8N131 208 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 RBPMSQ93062 196 aaKnown RBP13.1□□□□□ -0.31
CUX2-201ENST00000261726 RBFOX1Q9NWB1 397 aaKnown RBP13.1□□□□□ -0.31
CUX2-201ENST00000261726 CHRNA9Q9UGM1 479 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 BOLA1Q9Y3E2 137 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 IGKV6D-21A0A0A0MT36 114 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 BCL6P41182 706 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 GPR12P47775 334 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 KCNAB1Q14722 419 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 ALKBH6Q3KRA9 238 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 ZNF740Q8NDX6 193 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 LURAP1Q96LR2 239 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 TXLNGYQ9BZA5 131 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 RYDENQ9NUL5 291 aaKnown RBP13.1□□□□□ -0.31
CUX2-201ENST00000261726 DUSP1P28562 367 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 MYBPHQ13203 477 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 MLF2Q15773 248 aaPredicted RBP13.1□□□□□ -0.31
CUX2-201ENST00000261726 C4orf17Q53FE4 359 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 SOWAHCQ53LP3 525 aaPredicted RBP13.1□□□□□ -0.31
CUX2-201ENST00000261726 ANKRD16Q6P6B7 361 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 ZFP62Q8NB50 900 aaPredicted RBP13.1□□□□□ -0.31
CUX2-201ENST00000261726 ARFGAP1Q8N6T3 406 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 OR2AE1Q8NHA4 323 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 CLEC2DQ9UHP7 191 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 SLCO1B1Q9Y6L6 691 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 TNRC6CQ9HCJ0 1690 aaKnown RBP13.1□□□□□ -0.31
CUX2-201ENST00000261726 COL2A1P02458 1487 aaPredicted RBP13.09□□□□□ -0.31
CUX2-201ENST00000261726 A0A1B0GUL6 1792 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 GLAP06280 429 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 H2AFB1P0C5Y9 115 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 ADAM5Q6NVV9 412 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 HIST2H3AQ71DI3 136 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 RHOUQ7L0Q8 258 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 SLC51BQ86UW2 128 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 WFDC8Q8IUA0 241 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 CPEB3Q8NE35 698 aaKnown RBP13.09□□□□□ -0.31
CUX2-201ENST00000261726 CORO2AQ92828 525 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 CSAG2Q9Y5P2 127 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 SULT1C4O75897 302 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 NHSL2Q5HYW2 709 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 PTCRAQ6ISU1 281 aaPredicted RBP13.09□□□□□ -0.31
CUX2-201ENST00000261726 CGB2Q6NT52 195 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 C17orf99Q6UX52 265 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 H1FNTQ75WM6 255 aaPredicted RBP13.09□□□□□ -0.31
CUX2-201ENST00000261726 VPS25Q9BRG1 176 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 NDFIP1Q9BT67 221 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 CHST8Q9H2A9 424 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 A4GALTQ9NPC4 353 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 FBXO8Q9NRD0 319 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 PPP5D1E7EU14 171 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 CNMDO75829 334 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 DUSP2Q05923 314 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 PRSS35Q8N3Z0 413 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 ARRDC2Q8TBH0 407 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 FIZ1Q96SL8 496 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 CRLF2Q9HC73 371 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 DIMT1Q9UNQ2 313 aaKnown RBP13.09□□□□□ -0.31
CUX2-201ENST00000261726 LTBP3Q9NS15 1303 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 GLCEO94923 617 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 IAPPP10997 89 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 PRR27Q6MZM9 219 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 CDC20BQ86Y33 519 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 OR6M1Q8NGM8 313 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 OR6K3Q8NGY3 331 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 MS4A8Q9BY19 250 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 SLC23A1Q9UHI7 598 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 C4AP0C0L4 1744 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 H0YIV9 168 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 CYTIPO60759 359 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 ALOX5APP20292 161 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 DTYMKP23919 212 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 RPS16P62249 146 aaKnown RBP13.09□□□□□ -0.31
CUX2-201ENST00000261726 ZNF239Q16600 458 aaKnown RBP13.09□□□□□ -0.31
CUX2-201ENST00000261726 RTL8BQ17RB0 113 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 LCN15Q6UWW0 184 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 SLC24A4Q8NFF2 622 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 OR51F2Q8NH61 342 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 SAGE1Q9NXZ1 904 aa13.09□□□□□ -0.31
CUX2-201ENST00000261726 ZNF230Q9UIE0 474 aaPredicted RBP13.09□□□□□ -0.31
CUX2-201ENST00000261726 TRABD2BA6NFA1 517 aa13.08□□□□□ -0.31
CUX2-201ENST00000261726 GPR171O14626 319 aa13.08□□□□□ -0.31
CUX2-201ENST00000261726 SELEP16581 610 aa13.08□□□□□ -0.31
CUX2-201ENST00000261726 CLDN10P78369 228 aa13.08□□□□□ -0.31
CUX2-201ENST00000261726 MAML2Q8IZL2 1156 aaPredicted RBP13.08□□□□□ -0.31
CUX2-201ENST00000261726 OR10AD1Q8NGE0 317 aa13.08□□□□□ -0.31
CUX2-201ENST00000261726 BCO1Q9HAY6 547 aa13.08□□□□□ -0.31
CUX2-201ENST00000261726 B4GALT3O60512 393 aa13.08□□□□□ -0.32
CUX2-201ENST00000261726 CD14P08571 375 aa13.08□□□□□ -0.32
CUX2-201ENST00000261726 EXT1Q16394 746 aa13.08□□□□□ -0.32
CUX2-201ENST00000261726 ZNF2Q9BSG1 426 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms