RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 AFMIDQ63HM1 303 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 PXT1Q8NFP0 134 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 OR13C5Q8NGS8 318 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 TERB2Q8NHR7 220 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 MYEOVQ96EZ4 313 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 GPR78Q96P69 363 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 C1QTNF3Q9BXJ4 246 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 PRELID3BQ9Y3B1 194 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 APOBEC1P41238 236 aaKnown RBP11.06□□□□□ -0.64
COL8A1-201ENST00000261037 PPIAP62937 165 aaKnown RBP11.06□□□□□ -0.64
COL8A1-201ENST00000261037 RPS19BP1Q86WX3 136 aaKnown RBP11.06□□□□□ -0.64
COL8A1-201ENST00000261037 RTL8AQ9BWD3 113 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 BARHL1Q9BZE3 327 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 SMCO4Q9NRQ5 59 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 RBFOX1Q9NWB1 397 aaKnown RBP11.06□□□□□ -0.64
COL8A1-201ENST00000261037 SLC5A6Q9Y289 635 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 LOC107986453A0A1B0GWG9 222 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 MT-ATP6P00846 226 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 FAM157BP0CG42 384 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 EIF2DP41214 584 aaKnown RBP11.06□□□□□ -0.64
COL8A1-201ENST00000261037 DMWDQ09019 674 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 DLEU7Q6UYE1 221 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 TMEM182Q6ZP80 229 aaPredicted RBP11.06□□□□□ -0.64
COL8A1-201ENST00000261037 PTRH1Q86Y79 214 aaKnown RBP11.06□□□□□ -0.64
COL8A1-201ENST00000261037 NKAIN3Q8N8D7 197 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 C3orf49Q96BT1 292 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 SPACA5Q96QH8 159 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 ARV1Q9H2C2 271 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 UGT2A1Q9Y4X1 527 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 KLK4Q9Y5K2 254 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 FAM221AA4D161 298 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 C5orf49A4QMS7 147 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 TRABD2BA6NFA1 517 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 TSTD3H0UI37 97 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 HRO43593 1189 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 TFAP2AP05549 437 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 GLI4P10075 376 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 ELAVL1Q15717 326 aaKnown RBP11.06□□□□□ -0.64
COL8A1-201ENST00000261037 DUSP6Q16828 381 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 ETFBKMTQ8IXQ9 262 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 CA13Q8N1Q1 262 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 NANOGP1Q8N7R0 232 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 PTTG3PQ9NZH4 202 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 CHRNA9Q9UGM1 479 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 TMEM265A0A087WTH1 108 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 ARPC4-TTLL3A0A0A6YYG9 625 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 TRDV1A0A1B0GX56 115 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 HOXC11O43248 304 aaPredicted RBP11.06□□□□□ -0.64
COL8A1-201ENST00000261037 TMPRSS11DO60235 418 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 MAGEB1P43366 347 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.06□□□□□ -0.64
COL8A1-201ENST00000261037 H2BFWTQ7Z2G1 175 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 DEFB108BQ8NET1 73 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 OR6M1Q8NGM8 313 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 SDF2Q99470 211 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 MYH9P35579 1960 aaKnown RBP11.05□□□□□ -0.64
COL8A1-201ENST00000261037 ATP1B1P05026 303 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 FOSL1P15407 271 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 S100A7P31151 101 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 DEFB109BQ30KR1 87 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 SYT14P1Q58G82 188 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 ANKRD34AQ69YU3 496 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 FAM185AQ8N0U4 392 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 SLAMF6Q96DU3 332 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 TEAD3Q99594 435 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 SHARPINQ9H0F6 387 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 TNRC6CQ9HCJ0 1690 aaKnown RBP11.05□□□□□ -0.64
COL8A1-201ENST00000261037 SHISA7A6NL88 538 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 BHLHE40O14503 412 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 ZNF26P17031 533 aaPredicted RBP11.05□□□□□ -0.64
COL8A1-201ENST00000261037 SLC35A2P78381 396 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 FAPQ12884 760 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 TMEM240Q5SV17 173 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 DEFB123Q8N688 67 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 OR52N1Q8NH53 320 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 LILRB4Q8NHJ6 448 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 LTB4R2Q9NPC1 389 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 ST6GAL1P15907 406 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 CNR1P21554 472 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 EMP3P54852 163 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 DMRTC1Q5HYR2 192 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 USP51Q70EK9 711 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 TMUB2Q71RG4 321 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 RHOUQ7L0Q8 258 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 DOK3Q7L591 496 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 WFDC8Q8IUA0 241 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 SLC35B4Q969S0 331 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 KIRREL1Q96J84 757 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 GON7Q9BXV9 100 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 CRLF2Q9HC73 371 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 MMP17Q9ULZ9 603 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 PCYT1BQ9Y5K3 369 aaPredicted RBP11.05□□□□□ -0.64
COL8A1-201ENST00000261037 SIPA1L3O60292 1781 aaPredicted RBP11.05□□□□□ -0.64
COL8A1-201ENST00000261037 E9PI62 339 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 TRAF3IP2O43734 574 aaPredicted RBP11.05□□□□□ -0.64
COL8A1-201ENST00000261037 EIF4E2O60573 245 aaKnown RBP11.05□□□□□ -0.64
COL8A1-201ENST00000261037 TGFBR1P36897 503 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 RPS27P42677 84 aaKnown RBP11.05□□□□□ -0.64
COL8A1-201ENST00000261037 RAD52P43351 418 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 NDUFA6P56556 154 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms