RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 CTSVO60911 334 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 CNOT4O95628 575 aaKnown RBP12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 CDK1P06493 297 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 LIFP15018 202 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 BRS3P32247 399 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 HES1Q14469 280 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 FAM185AQ8N0U4 392 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 OR1F12Q8NHA8 337 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 NRIP3Q9NQ35 241 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 A0A087WUJ7 227 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 SMCO3A2RU48 225 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 NPIPB8E9PQR5 432 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 GUSBP08236 651 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 SLC25A1P53007 311 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 EDDM3BP56851 147 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 CAMK2BQ13554 666 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 ZNF181Q2M3W8 571 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 C10orf35Q96D05 121 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 FBXO17Q96EF6 278 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 DNAJA3Q96EY1 480 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 C10orf90Q96M02 699 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 FBXO45P0C2W1 286 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 MYF5P13349 255 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 PTNP21246 168 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 HTR2CP28335 458 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 SNCAP37840 140 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 TBCEQ15813 527 aaPredicted RBP12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 NHSL2Q5HYW2 709 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 GABRG1Q8N1C3 465 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 ZBTB44Q8NCP5 570 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 OR10X1Q8NGY0 326 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 OR4A16Q8NH70 328 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 CXXC4Q9H2H0 198 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 COA3Q9Y2R0 106 aaPredicted RBP12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 M0R233 179 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 SNAP29O95721 258 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 SERPINA2P20848 420 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 TGM4P49221 684 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 SQSTM1Q13501 440 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 METAP1DQ6UB28 335 aaPredicted RBP12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 OR10G3Q8NGC4 313 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 SPSB1Q96BD6 273 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 HINT2Q9BX68 163 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 ALG5Q9Y673 324 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 MYO5AQ9Y4I1 1855 aaKnown RBP12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 ZNF736B4DX44 427 aaPredicted RBP12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 ENSAO43768 121 aaKnown RBP12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 PRKRAO75569 313 aaKnown RBP12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 OR7C1O76099 320 aaPredicted RBP12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 PIPP12273 146 aaPredicted RBP12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 PTAFRP25105 342 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 EIF4EBP2Q13542 120 aaPredicted RBP12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 TAAR8Q969N4 342 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 KIF25Q9UIL4 384 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 MPC1Q9Y5U8 109 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 C17orf112F2Z3M2 114 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 TSPAN4O14817 238 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 NTRK2Q16620 822 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 DUSP7Q16829 419 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 ZNF791Q3KP31 576 aaPredicted RBP12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 TMED4Q7Z7H5 227 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 ZNF547Q8IVP9 402 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 SULF2Q8IWU5 870 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 RHNO1Q9BSD3 238 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 ZNF416Q9BWM5 594 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 SLC35F4A4IF30 521 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 FPR2P25090 351 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 GCAP28676 217 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 METAP1P53582 386 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 CFHR1Q03591 330 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 IQCF1Q8N6M8 205 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 ZNF615Q8N8J6 731 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 ANKRD60Q9BZ19 345 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 GABARAPL1Q9H0R8 117 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 FAM234AQ9H0X4 552 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 ZNF696Q9H7X3 374 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 ISYNA1Q9NPH2 558 aa12.13□□□□□ -0.47
PRPF38A-201ENST00000257181 FITM1A5D6W6 292 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 BHLHE40O14503 412 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 SULT1B1O43704 296 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 NFYAP23511 347 aaPredicted RBP12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 CEACAM16Q2WEN9 425 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 CMPK2Q5EBM0 449 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 TFAP2EQ6VUC0 442 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 LINC01555Q8NAE3 123 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 ABHD6Q9BV23 337 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 NECAP2Q9NVZ3 263 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 TRAV18A0A075B6X5 111 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 SLC16A6O15403 523 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 GRPP07492 148 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 PSMA6P60900 246 aaKnown RBP12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 MICBQ29980 383 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 SLC37A3Q8NCC5 494 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 SLC30A7Q8NEW0 376 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 TMEM255BQ8WV15 326 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 SLC6A7Q99884 636 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 PIMREGQ9BSJ6 248 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 COPS3Q9UNS2 423 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 R4GMQ9 66 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 I6L893 689 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms