RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 LACC1Q8IV20 430 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 RDH5Q92781 318 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 SLAMF6Q96DU3 332 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 ARPC5LQ9BPX5 153 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 PTDSS2Q9BVG9 487 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 BARHL1Q9BZE3 327 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 PLK3Q9H4B4 646 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 OR2A25A4D2G3 310 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 PLPP5Q8NEB5 264 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 SDCBPO00560 298 aaPredicted RBP17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 SBK2P0C263 348 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 APOBEC1P41238 236 aaKnown RBP17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 GABRA4P48169 554 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 ROBO4Q8WZ75 1007 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 KCTD12Q96CX2 325 aaKnown RBP17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 OR52A5Q9H2C5 316 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 DUSP22Q9NRW4 184 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 NECAP2Q9NVZ3 263 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 GRB2P62993 217 aaKnown RBP17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 RAB22AQ9UL26 194 aa17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 TARM1B6A8C7 271 aa17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 SPINT2O43291 252 aa17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 HYAL3O43820 417 aaPredicted RBP17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 PPP3CBP16298 524 aa17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 OR10A3P58181 314 aa17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 OR51F2Q8NH61 342 aa17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 MUTYHQ9UIF7 546 aa17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 EIF2DP41214 584 aaKnown RBP17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 HNRNPFP52597 415 aaKnown RBP17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 RPL18Q07020 188 aaKnown RBP17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 MRPL58Q14197 206 aaKnown RBP17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 C20orf24Q9BUV8 137 aa17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 RAD52P43351 418 aa17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 CMIPQ8IY22 773 aa17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 MT-ATP6P00846 226 aa17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 ATP1B1P05026 303 aa17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 PI3P19957 117 aa17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 TBXA2RP21731 343 aa17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 DPTQ07507 201 aa17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 DPPA2Q7Z7J5 298 aa17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 NANOGP1Q8N7R0 232 aa17.05■□□□□ 0.32
SMARCC1-201ENST00000254480 ZFP92A6NM28 416 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 ELK1P19419 428 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 AGERQ15109 404 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 OR51A4Q8NGJ6 313 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 OR51A2Q8NGJ7 313 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 OR5H6Q8NGV6 325 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 SNAPINO95295 136 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 SPI1P17947 270 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 OPRM1P35372 400 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 SLC6A12P48065 614 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 IHHQ14623 411 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 CLDN22Q8N7P3 220 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 ISL2Q96A47 359 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 SLCO4A1Q96BD0 722 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 C17orf112F2Z3M2 114 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 LGALS8O00214 317 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 UPK1AO00322 258 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 EIF4E2O60573 245 aaKnown RBP17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 SOD1P00441 154 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 ALOX5APP20292 161 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 HOXD12P35452 270 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 SOX18P35713 384 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 ZNF92Q03936 586 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 GALEQ14376 348 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 CLVS2Q5SYC1 327 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 AGBL4Q5VU57 503 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 OR6M1Q8NGM8 313 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 SLC22A13Q9Y226 551 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 AHDC1Q5TGY3 1603 aaPredicted RBP17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 TRDV1A0A1B0GX56 115 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 CEACAM5P06731 702 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 CCL7P80098 99 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 SLC35G3Q8N808 338 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 OR10J5Q8NHC4 309 aa17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 RPP25Q9BUL9 199 aaKnown RBP17.04■□□□□ 0.32
SMARCC1-201ENST00000254480 PLRG1O43660 514 aaKnown RBP17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 MDGA2Q7Z553 956 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 ITPKCQ96DU7 683 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 LRRC30A6NM36 301 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 IGLV3-27P01718 113 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 SRFP11831 508 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 SPATA46Q5T0L3 261 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 OR10R2Q8NGX6 335 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 C11orf40Q8WZ69 217 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 B3GAT1Q9P2W7 334 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 PURGQ9UJV8 347 aaKnown RBP17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 OIP5O43482 229 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 AADACP22760 399 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 P2RX3P56373 397 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 OR10K2Q6IF99 312 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 OR52N1Q8NH53 320 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 OR52I2Q8NH67 350 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 EXO1Q9UQ84 846 aaKnown RBP17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 A0A1B0GUL6 1792 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 A0A0D9SG52 128 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 A0A1W2PPC4 97 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 ZGLP1P0C6A0 271 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 CLDN15P56746 228 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms