RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 MYEF2Q9P2K5 600 aaKnown RBP11.83□□□□□ -0.52
VEGFA-201ENST00000230480 TMCC3Q9ULS5 477 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 B9D1Q9UPM9 204 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 SONP18583 2426 aaKnown RBP11.83□□□□□ -0.52
VEGFA-201ENST00000230480 ABCA2Q9BZC7 2435 aa11.83□□□□□ -0.52
VEGFA-201ENST00000230480 NF1P21359 2839 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 A0A096LNT2 108 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 TRIM64A6NGJ6 449 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 TRIM64BA6NI03 449 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 SLC16A7O60669 478 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 TMCC2O75069 709 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 TIPRLO75663 272 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 LY6HO94772 140 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 CST2P09228 141 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 ANOS1P23352 680 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 APEX1P27695 318 aaKnown RBP11.82□□□□□ -0.52
VEGFA-201ENST00000230480 FABP6P51161 128 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 ZNF84P51523 738 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 ERVS71-1P61550 626 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 HIST1H3AP68431 136 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 EFNB3Q15768 340 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 CLEC12AQ5QGZ9 265 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 SLC35F1Q5T1Q4 408 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 HIST2H3PS2Q5TEC6 136 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 KRT80Q6KB66 452 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 PRSS57Q6UWY2 283 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 HIST2H3AQ71DI3 136 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 HDDC2Q7Z4H3 204 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 ZBTB46Q86UZ6 589 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 LNX2Q8N448 690 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 OR10G2Q8NGC3 310 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 C11orf40Q8WZ69 217 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 LRGUKQ96M69 825 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 SNX18Q96RF0 628 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 CACNG6Q9BXT2 260 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 NMNAT2Q9BZQ4 307 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 OR2H1Q9GZK4 316 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 PLK3Q9H4B4 646 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 ZNF442Q9H7R0 627 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 REEP1Q9H902 201 aa11.82□□□□□ -0.52
VEGFA-201ENST00000230480 MRPL22Q9NWU5 206 aaKnown RBP11.82□□□□□ -0.52
VEGFA-201ENST00000230480 CHCHD3Q9NX63 227 aaKnown RBP11.82□□□□□ -0.52
VEGFA-201ENST00000230480 SMIM31A0A1B0GVY4 71 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 ARRDC5A6NEK1 342 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 ENTPD5O75356 428 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 SOX14O95416 240 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 OR4A8P0C604 315 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 NPR2P20594 1047 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 SLC6A6P31641 620 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 MEP1BQ16820 701 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 CCDC92Q53HC0 331 aaPredicted RBP11.81□□□□□ -0.52
VEGFA-201ENST00000230480 SHEQ5VZ18 495 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 ACSM5Q6NUN0 579 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 ZNF774Q6NX45 483 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 LYPD4Q6UWN0 246 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 ADCK1Q86TW2 530 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 ZNF101Q8IZC7 436 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 ZCCHC24Q8N2G6 241 aaKnown RBP11.81□□□□□ -0.52
VEGFA-201ENST00000230480 OR4F15Q8NGB8 312 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 FNDC8Q8TC99 324 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 GIPC3Q8TF64 312 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 NANOS1Q8WY41 292 aaKnown RBP11.81□□□□□ -0.52
VEGFA-201ENST00000230480 POP5Q969H6 163 aaKnown RBP11.81□□□□□ -0.52
VEGFA-201ENST00000230480 PPP1R14BQ96C90 147 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 SMR3AQ99954 134 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 IFT27Q9BW83 186 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 RBM4Q9BWF3 364 aaKnown RBP11.81□□□□□ -0.52
VEGFA-201ENST00000230480 HCAR1Q9BXC0 346 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 MRPL37Q9BZE1 423 aaKnown RBP11.81□□□□□ -0.52
VEGFA-201ENST00000230480 GSX1Q9H4S2 264 aaPredicted RBP11.81□□□□□ -0.52
VEGFA-201ENST00000230480 SRA1Q9HD15 236 aaKnown RBP11.81□□□□□ -0.52
VEGFA-201ENST00000230480 ARMC1Q9NVT9 282 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 DNAJB9Q9UBS3 223 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 LHFPL6Q9Y693 200 aa11.81□□□□□ -0.52
VEGFA-201ENST00000230480 A0A1W2PPL8 197 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 FAM171A2A8MVW0 826 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 H7C417 338 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 IDH3BO43837 385 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 KHDRBS3O75525 346 aaKnown RBP11.8□□□□□ -0.52
VEGFA-201ENST00000230480 CIB2O75838 187 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 SNAP29O95721 258 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 NGFP01138 241 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 LYNP07948 512 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 MSR1P21757 451 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 NOS3P29474 1203 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 GLRXP35754 106 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 GGT2P36268 569 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 SERPINF1P36955 418 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 IFNGR2P38484 337 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 ATP5J2P56134 94 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 KRTAP1-1Q07627 177 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 SNTB2Q13425 540 aaKnown RBP11.8□□□□□ -0.52
VEGFA-201ENST00000230480 LSAMPQ13449 338 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 DAG1Q14118 895 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 LINC01590Q5TEZ4 76 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 AGAP6Q5VW22 663 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 LEG1Q6P5S2 330 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 VHLLQ6RSH7 139 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 ALDH16A1Q8IZ83 802 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 LINC00471Q8N535 108 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms