RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 DEFB107AQ8IZN7 70 aa12.17□□□□□ -0.46
GPN3-201ENST00000228827 RDH5Q92781 318 aa12.17□□□□□ -0.46
GPN3-201ENST00000228827 YIPF5Q969M3 257 aa12.17□□□□□ -0.46
GPN3-201ENST00000228827 NSMCE2Q96MF7 247 aa12.17□□□□□ -0.46
GPN3-201ENST00000228827 GPA33Q99795 319 aa12.17□□□□□ -0.46
GPN3-201ENST00000228827 SHARPINQ9H0F6 387 aa12.17□□□□□ -0.46
GPN3-201ENST00000228827 KRCC1Q9NPI7 259 aaPredicted RBP12.17□□□□□ -0.46
GPN3-201ENST00000228827 HINT3Q9NQE9 182 aaKnown RBP12.17□□□□□ -0.46
GPN3-201ENST00000228827 POLE4Q9NR33 117 aa12.17□□□□□ -0.46
GPN3-201ENST00000228827 SLCO1C1Q9NYB5 712 aa12.17□□□□□ -0.46
GPN3-201ENST00000228827 EIF3KQ9UBQ5 218 aaKnown RBP12.17□□□□□ -0.46
GPN3-201ENST00000228827 CD300AQ9UGN4 299 aa12.17□□□□□ -0.46
GPN3-201ENST00000228827 GPR160Q9UJ42 338 aa12.17□□□□□ -0.46
GPN3-201ENST00000228827 IER3IP1Q9Y5U9 82 aa12.17□□□□□ -0.46
GPN3-201ENST00000228827 IGLV3-9A0A075B6K5 115 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 C17orf100A8MU93 164 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 SOCS2O14508 198 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 GADD45GO95257 159 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 SEMG1P04279 462 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 TACSTD2P09758 323 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 CTLA4P16410 223 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 ITGA2P17301 1181 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 SDHAP31040 664 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 MPV17P39210 176 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 GPR6P46095 362 aaPredicted RBP12.16□□□□□ -0.46
GPN3-201ENST00000228827 FXYD6P3P58550 94 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 CCL8P80075 99 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 C16orf89Q6UX73 402 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 ALDH16A1Q8IZ83 802 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 ABHD4Q8TB40 342 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 SLC25A40Q8TBP6 338 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 MCUR1Q96AQ8 359 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 DHRS1Q96LJ7 313 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 NRIP3Q9NQ35 241 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 TMEM160Q9NX00 188 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 ARFGEF3Q5TH69 2177 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 DNHD1Q96M86 4753 aa12.16□□□□□ -0.46
GPN3-201ENST00000228827 C12orf71A8MTZ7 269 aa12.15□□□□□ -0.46
GPN3-201ENST00000228827 SLC16A7O60669 478 aa12.15□□□□□ -0.46
GPN3-201ENST00000228827 CDC14BO60729 498 aa12.15□□□□□ -0.46
GPN3-201ENST00000228827 IFNA2P01563 188 aa12.15□□□□□ -0.46
GPN3-201ENST00000228827 FABP3P05413 133 aa12.15□□□□□ -0.46
GPN3-201ENST00000228827 GCH1P30793 250 aa12.15□□□□□ -0.46
GPN3-201ENST00000228827 TSTQ16762 297 aaKnown RBP12.15□□□□□ -0.46
GPN3-201ENST00000228827 ZNF718Q3SXZ3 478 aa12.15□□□□□ -0.46
GPN3-201ENST00000228827 PTCHD4Q6ZW05 846 aa12.15□□□□□ -0.46
GPN3-201ENST00000228827 RFPL4BQ6ZWI9 263 aa12.15□□□□□ -0.46
GPN3-201ENST00000228827 ZER1Q7Z7L7 766 aa12.15□□□□□ -0.46
GPN3-201ENST00000228827 IPCEF1Q8WWN9 437 aaPredicted RBP12.15□□□□□ -0.46
GPN3-201ENST00000228827 GPX7Q96SL4 187 aaPredicted RBP12.15□□□□□ -0.46
GPN3-201ENST00000228827 FUZQ9BT04 418 aa12.15□□□□□ -0.46
GPN3-201ENST00000228827 OR2J1Q9GZK6 312 aa12.15□□□□□ -0.46
GPN3-201ENST00000228827 SYT4Q9H2B2 425 aa12.15□□□□□ -0.46
GPN3-201ENST00000228827 ZNF275Q9NSD4 429 aaPredicted RBP12.15□□□□□ -0.46
GPN3-201ENST00000228827 COA3Q9Y2R0 106 aaPredicted RBP12.15□□□□□ -0.46
GPN3-201ENST00000228827 TPD52L2O43399 206 aaKnown RBP12.14□□□□□ -0.47
GPN3-201ENST00000228827 PPIHO43447 177 aaKnown RBP12.14□□□□□ -0.47
GPN3-201ENST00000228827 OR10H3O60404 316 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 MPZL1O95297 269 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 PPP1R3DO95685 299 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 NGFP01138 241 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 FAM157CP0CG43 387 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 ACHEP22303 614 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 RPS6KA3P51812 740 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 SMIM11AP58511 58 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 TMEM255AQ5JRV8 349 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 FAM120AOSQ5T036 256 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 GPR139Q6DWJ6 353 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 SMARCD3Q6STE5 483 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 CYP2R1Q6VVX0 501 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 DPY19L2P2Q6ZN68 376 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.14□□□□□ -0.47
GPN3-201ENST00000228827 FANK1Q8TC84 345 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 MARS2Q96GW9 593 aaKnown RBP12.14□□□□□ -0.47
GPN3-201ENST00000228827 NUAK2Q9H093 628 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 NDE1Q9NXR1 346 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 LPAR3Q9UBY5 353 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 ABCA2Q9BZC7 2435 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 WNT9BO14905 357 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 AHCYL1O43865 530 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 DOK2O60496 412 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 KHDRBS3O75525 346 aaKnown RBP12.14□□□□□ -0.47
GPN3-201ENST00000228827 GPANK1O95872 356 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 IGHV3-13P01766 116 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 RRM2P31350 389 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 CDKN2AP42771 156 aaKnown RBP12.14□□□□□ -0.47
GPN3-201ENST00000228827 HTR5AP47898 357 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 CENPAP49450 140 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 PPP1CBP62140 327 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 DBPQ10586 325 aaPredicted RBP12.14□□□□□ -0.47
GPN3-201ENST00000228827 MOGQ16653 247 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 UNQ6126/PRO20091Q6UXV3 157 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 SYT9Q86SS6 491 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 FITM2Q8N6M3 262 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 LINC01356Q8N9X3 169 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 KLF14Q8TD94 323 aaPredicted RBP12.14□□□□□ -0.47
GPN3-201ENST00000228827 HPS1Q92902 700 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 C4orf45Q96LM5 186 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 TSSK2Q96PF2 358 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 ERMAPQ96PL5 475 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms