RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 RUNX2Q13950 521 aa13.21□□□□□ -0.29
PRDM4-201ENST00000228437 ATPAF1Q5TC12 328 aaPredicted RBP13.21□□□□□ -0.29
PRDM4-201ENST00000228437 PNLDC1Q8NA58 520 aaKnown RBP13.21□□□□□ -0.29
PRDM4-201ENST00000228437 PTPRDP23468 1912 aa13.21□□□□□ -0.3
PRDM4-201ENST00000228437 TET1Q8NFU7 2136 aa13.21□□□□□ -0.3
PRDM4-201ENST00000228437 A0A1W2PPH5 198 aa13.21□□□□□ -0.3
PRDM4-201ENST00000228437 RHPN2P1A8MT19 583 aa13.21□□□□□ -0.3
PRDM4-201ENST00000228437 CTDSPLO15194 276 aa13.21□□□□□ -0.3
PRDM4-201ENST00000228437 NDUFS6O75380 124 aaKnown RBP13.21□□□□□ -0.3
PRDM4-201ENST00000228437 SLC22A6Q4U2R8 563 aa13.21□□□□□ -0.3
PRDM4-201ENST00000228437 TMEM31Q5JXX7 168 aa13.21□□□□□ -0.3
PRDM4-201ENST00000228437 SLC39A5Q6ZMH5 540 aa13.21□□□□□ -0.3
PRDM4-201ENST00000228437 OR4K15Q8NH41 348 aa13.21□□□□□ -0.3
PRDM4-201ENST00000228437 TMPRSS13Q9BYE2 586 aa13.21□□□□□ -0.3
PRDM4-201ENST00000228437 FRRS1LQ9P0K9 344 aa13.21□□□□□ -0.3
PRDM4-201ENST00000228437 G3V3Q6 166 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 P2RY10O00398 339 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 OR8U9P0C7N5 309 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 GNB3P16520 340 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 ADRA2CP18825 462 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 ARRB1P49407 418 aaPredicted RBP13.2□□□□□ -0.3
PRDM4-201ENST00000228437 PMPCAQ10713 525 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 HNRNPA1L2Q32P51 320 aaKnown RBP13.2□□□□□ -0.3
PRDM4-201ENST00000228437 C4orf17Q53FE4 359 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 TMPRSS11FQ6ZWK6 438 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 PGAP1Q75T13 922 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 FLRT3Q9NZU0 649 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 AUP1Q9Y679 476 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 CPED1A4D0V7 1026 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 IFNA21P01568 189 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 H2BFMP0C1H6 154 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 ARL4DP49703 201 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 PRPS1P60891 318 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 CSNK2A1P68400 391 aaPredicted RBP13.2□□□□□ -0.3
PRDM4-201ENST00000228437 SLC18B1Q6NT16 456 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 MDGA2Q7Z553 956 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 C12orf40Q86WS4 652 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 CSNK2A3Q8NEV1 391 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 CCDC74AQ96AQ1 378 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 SEMA6CQ9H3T2 930 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 BANF2Q9H503 90 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 IGFLR1Q9H665 355 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 TAF9BQ9HBM6 251 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 NPTNQ9Y639 398 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 CLDN4O14493 209 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 ICOSLGO75144 302 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 ACY1Q03154 408 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 NOGQ13253 232 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 ACTBL2Q562R1 376 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 CA5BP1Q8WTZ4 195 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 GIMAP5Q96F15 307 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 ZNF587Q96SQ5 575 aaPredicted RBP13.2□□□□□ -0.3
PRDM4-201ENST00000228437 CERS4Q9HA82 394 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 KLHDC2Q9Y2U9 406 aa13.2□□□□□ -0.3
PRDM4-201ENST00000228437 TMEM212A6NML5 194 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 GPR75O95800 540 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 WNT11O96014 354 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 ACTL6AO96019 429 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 SLC2A1P11166 492 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 ABCD3P28288 659 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 MPGP29372 298 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 F2RL1P55085 397 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 RASGEF1BQ0VAM2 473 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 INPP5JQ15735 1006 aaPredicted RBP13.19□□□□□ -0.3
PRDM4-201ENST00000228437 STPG1Q5TH74 334 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 CORO6Q6QEF8 472 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 SLC39A11Q8N1S5 342 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 RNASE11Q8TAA1 199 aaKnown RBP13.19□□□□□ -0.3
PRDM4-201ENST00000228437 FAM71F1Q96KD3 344 aaPredicted RBP13.19□□□□□ -0.3
PRDM4-201ENST00000228437 FBRSQ9HAH7 460 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 PARPBPQ9NWS1 579 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 B3GALT1Q9Y5Z6 326 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 TMEM272A0A1B0GTI8 110 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 IFNA17P01571 189 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 EMP2P54851 167 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 FXYD4P59646 89 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 RPS15AP62244 130 aaKnown RBP13.19□□□□□ -0.3
PRDM4-201ENST00000228437 RIPPLY1Q0D2K3 151 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 C1orf61Q13536 156 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 DPY19L2P2Q6ZN68 376 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 OR5M8Q8NGP6 311 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 EPHX3Q9H6B9 360 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.19□□□□□ -0.3
PRDM4-201ENST00000228437 AMDHD2Q9Y303 409 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 RHBDD3Q9Y3P4 386 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 PAPPA2Q9BXP8 1791 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 WRBO00258 174 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 P2RX6O15547 441 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 S100A8P05109 93 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 CD14P08571 375 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 PJVKQ0ZLH3 352 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 SGCAQ16586 387 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 OR51A2Q8NGJ7 313 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 ADOQ96SZ5 270 aa13.19□□□□□ -0.3
PRDM4-201ENST00000228437 MRM2Q9UI43 246 aaKnown RBP13.19□□□□□ -0.3
PRDM4-201ENST00000228437 TMEM269A0A1B0GVZ9 245 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 ZNF705GA8MUZ8 300 aaPredicted RBP13.18□□□□□ -0.3
PRDM4-201ENST00000228437 NRG2O14511 850 aaPredicted RBP13.18□□□□□ -0.3
PRDM4-201ENST00000228437 PRAMEF8Q5VWM4 474 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms