RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 IGLV1-36A0A0B4J1U3 117 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 IQCMA0A1B0GVH7 501 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 EBAG9O00559 213 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 IDH3BO43837 385 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 CIB2O75838 187 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 IGHV4-39P01824 125 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 FAM157BP0CG42 384 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 GSTM3P21266 225 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 CCNOP22674 350 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 GALK2Q01415 458 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 GABPB1Q06547 395 aaPredicted RBP10.94□□□□□ -0.66
LSM5-201ENST00000223084 GK3PQ14409 553 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 MEP1BQ16820 701 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 TBC1D28Q2M2D7 210 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 ZNF774Q6NX45 483 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 CD300LDQ6UXZ3 194 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 GLB1L2Q8IW92 636 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 SVOPLQ8N434 492 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 IQCF1Q8N6M8 205 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 CYB561A3Q8NBI2 242 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 NPEPL1Q8NDH3 523 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 C11orf40Q8WZ69 217 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 Q96MF0 132 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 SNX18Q96RF0 628 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 CDH20Q9HBT6 801 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 REV1Q9UBZ9 1251 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 TIMM10BQ9Y5J6 103 aa10.94□□□□□ -0.66
LSM5-201ENST00000223084 LOC100509620A0A075B734 347 aa10.93□□□□□ -0.66
LSM5-201ENST00000223084 TMEM129A0AVI4 362 aa10.93□□□□□ -0.66
LSM5-201ENST00000223084 ARRDC5A6NEK1 342 aa10.93□□□□□ -0.66
LSM5-201ENST00000223084 C12orf71A8MTZ7 269 aa10.93□□□□□ -0.66
LSM5-201ENST00000223084 PTHP01270 115 aa10.93□□□□□ -0.66
LSM5-201ENST00000223084 CD99P14209 185 aa10.93□□□□□ -0.66
LSM5-201ENST00000223084 STOMP27105 288 aa10.93□□□□□ -0.66
LSM5-201ENST00000223084 CRABP1P29762 137 aa10.93□□□□□ -0.66
LSM5-201ENST00000223084 APLNRP35414 380 aa10.93□□□□□ -0.66
LSM5-201ENST00000223084 PCBD1P61457 104 aa10.93□□□□□ -0.66
LSM5-201ENST00000223084 ERVS71-1P61550 626 aa10.93□□□□□ -0.66
LSM5-201ENST00000223084 SLC36A3Q495N2 470 aa10.93□□□□□ -0.66
LSM5-201ENST00000223084 ZNF362Q5T0B9 420 aaPredicted RBP10.93□□□□□ -0.66
LSM5-201ENST00000223084 PRSS57Q6UWY2 283 aa10.93□□□□□ -0.66
LSM5-201ENST00000223084 LNX2Q8N448 690 aa10.93□□□□□ -0.66
LSM5-201ENST00000223084 SLC37A3Q8NCC5 494 aa10.93□□□□□ -0.66
LSM5-201ENST00000223084 POM121L2Q96KW2 1035 aa10.93□□□□□ -0.66
LSM5-201ENST00000223084 DDOQ99489 341 aa10.93□□□□□ -0.66
LSM5-201ENST00000223084 TMUB1Q9BVT8 246 aa10.93□□□□□ -0.66
LSM5-201ENST00000223084 ZNF442Q9H7R0 627 aa10.93□□□□□ -0.66
LSM5-201ENST00000223084 SPEF1Q9Y4P9 236 aa10.93□□□□□ -0.66
LSM5-201ENST00000223084 AP4S1Q9Y587 144 aa10.93□□□□□ -0.66
LSM5-201ENST00000223084 FLNAP21333 2647 aaKnown RBP10.93□□□□□ -0.66
LSM5-201ENST00000223084 C5orf49A4QMS7 147 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 TRIM64A6NGJ6 449 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 TRIM64BA6NI03 449 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 B9A039 149 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 H3BN98 237 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 DEAF1O75398 565 aaPredicted RBP10.92□□□□□ -0.66
LSM5-201ENST00000223084 LY6HO94772 140 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 TFP02787 698 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 GAAP10253 952 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 POU1F1P28069 291 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 PYCR1P32322 319 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 GLRXP35754 106 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 COX10Q12887 443 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 EFNB3Q15768 340 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 ATP6AP1Q15904 470 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 SHQ1Q6PI26 577 aaKnown RBP10.92□□□□□ -0.66
LSM5-201ENST00000223084 DNM1P34Q6PK57 102 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 AMIGO2Q86SJ2 522 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 LRP11Q86VZ4 500 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 ICA1LQ8NDH6 482 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 OR2T33Q8NG76 320 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 OR9Q1Q8NGQ5 310 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 OR1J2Q8NGS2 313 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 TEX47Q8TBZ9 253 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 ZNRF4Q8WWF5 429 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 LRTOMTQ8WZ04 291 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 SYT3Q9BQG1 590 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 MRPL37Q9BZE1 423 aaKnown RBP10.92□□□□□ -0.66
LSM5-201ENST00000223084 RACGAP1Q9H0H5 632 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 C1orf198Q9H425 327 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 PLK3Q9H4B4 646 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.92□□□□□ -0.66
LSM5-201ENST00000223084 ASH2LQ9UBL3 628 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 POLR1DQ9Y2S0 133 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 CMAHPQ9Y471 501 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 PMF1-BGLAPU3KQ54 211 aa10.92□□□□□ -0.66
LSM5-201ENST00000223084 FBN3Q75N90 2809 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 VPS13CQ709C8 3753 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 VSTM5A8MXK1 200 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 H7C417 338 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 RER1O15258 196 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 SSX4O60224 188 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 DOK2O60496 412 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 ANXA8P13928 327 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 WNT5AP41221 380 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 GDI2P50395 445 aaKnown RBP10.91□□□□□ -0.66
LSM5-201ENST00000223084 LSM6P62312 80 aaKnown RBP10.91□□□□□ -0.66
LSM5-201ENST00000223084 SNRPD2P62316 118 aaKnown RBP10.91□□□□□ -0.66
LSM5-201ENST00000223084 TEKQ02763 1124 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 SCRN3Q0VDG4 424 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms