RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 CDK5R2Q13319 367 aa13.29□□□□□ -0.28
NME3-201ENST00000219302 PIN1Q13526 163 aaPredicted RBP13.29□□□□□ -0.28
NME3-201ENST00000219302 BEND6Q5SZJ8 279 aaPredicted RBP13.29□□□□□ -0.28
NME3-201ENST00000219302 INTS11Q5TA45 600 aaKnown RBP13.29□□□□□ -0.28
NME3-201ENST00000219302 FOXL2NBQ6ZUU3 175 aa13.29□□□□□ -0.28
NME3-201ENST00000219302 BCL6BQ8N143 479 aaPredicted RBP13.29□□□□□ -0.28
NME3-201ENST00000219302 ABHD4Q8TB40 342 aa13.29□□□□□ -0.28
NME3-201ENST00000219302 ST7LQ8TDW4 575 aa13.29□□□□□ -0.28
NME3-201ENST00000219302 TSPEARQ8WU66 669 aa13.29□□□□□ -0.28
NME3-201ENST00000219302 TMEM239Q8WW34 195 aa13.29□□□□□ -0.28
NME3-201ENST00000219302 STON2Q8WXE9 905 aa13.29□□□□□ -0.28
NME3-201ENST00000219302 PATZ1Q9HBE1 687 aaKnown RBP13.29□□□□□ -0.28
NME3-201ENST00000219302 PLEK2Q9NYT0 353 aa13.29□□□□□ -0.28
NME3-201ENST00000219302 EGFL7Q9UHF1 273 aa13.29□□□□□ -0.28
NME3-201ENST00000219302 TIMM10BQ9Y5J6 103 aa13.29□□□□□ -0.28
NME3-201ENST00000219302 OR5F1O95221 314 aa13.28□□□□□ -0.28
NME3-201ENST00000219302 IGHMP01871 453 aa13.28□□□□□ -0.28
NME3-201ENST00000219302 CST2P09228 141 aa13.28□□□□□ -0.28
NME3-201ENST00000219302 ZNF12P17014 697 aa13.28□□□□□ -0.28
NME3-201ENST00000219302 TNFRSF1BP20333 461 aa13.28□□□□□ -0.28
NME3-201ENST00000219302 CD47Q08722 323 aa13.28□□□□□ -0.28
NME3-201ENST00000219302 ZNF154Q13106 437 aa13.28□□□□□ -0.28
NME3-201ENST00000219302 NFYCQ13952 458 aa13.28□□□□□ -0.28
NME3-201ENST00000219302 MTX3Q5HYI7 312 aa13.28□□□□□ -0.28
NME3-201ENST00000219302 RBMS3Q6XE24 437 aaKnown RBP13.28□□□□□ -0.28
NME3-201ENST00000219302 LRRC28Q86X40 367 aaPredicted RBP13.28□□□□□ -0.28
NME3-201ENST00000219302 ALDH16A1Q8IZ83 802 aa13.28□□□□□ -0.28
NME3-201ENST00000219302 ZNF283Q8N7M2 679 aa13.28□□□□□ -0.28
NME3-201ENST00000219302 CLDN22Q8N7P3 220 aa13.28□□□□□ -0.28
NME3-201ENST00000219302 C4orf45Q96LM5 186 aa13.28□□□□□ -0.28
NME3-201ENST00000219302 ZNF48Q96MX3 618 aaPredicted RBP13.28□□□□□ -0.28
NME3-201ENST00000219302 DUX5Q96PT3 197 aa13.28□□□□□ -0.28
NME3-201ENST00000219302 DCLRE1CQ96SD1 692 aaKnown RBP13.28□□□□□ -0.28
NME3-201ENST00000219302 ALG12Q9BV10 488 aa13.28□□□□□ -0.28
NME3-201ENST00000219302 POLR2J2Q9GZM3 115 aaKnown RBP13.28□□□□□ -0.28
NME3-201ENST00000219302 POLR2J3Q9H1A7 115 aaKnown RBP13.28□□□□□ -0.28
NME3-201ENST00000219302 TMEM106BQ9NUM4 274 aa13.28□□□□□ -0.28
NME3-201ENST00000219302 HIF3AQ9Y2N7 669 aa13.28□□□□□ -0.28
NME3-201ENST00000219302 INSIG2Q9Y5U4 225 aa13.28□□□□□ -0.28
NME3-201ENST00000219302 AUP1Q9Y679 476 aa13.28□□□□□ -0.28
NME3-201ENST00000219302 DNAJC9-AS1A6NH13 148 aa13.27□□□□□ -0.29
NME3-201ENST00000219302 ANGPT2O15123 496 aa13.27□□□□□ -0.29
NME3-201ENST00000219302 SCG5P05408 212 aa13.27□□□□□ -0.29
NME3-201ENST00000219302 VIMP08670 466 aaKnown RBP13.27□□□□□ -0.29
NME3-201ENST00000219302 TAS2R41P59536 307 aa13.27□□□□□ -0.29
NME3-201ENST00000219302 RPL27P61353 136 aaKnown RBP13.27□□□□□ -0.29
NME3-201ENST00000219302 SEC61A1P61619 476 aaKnown RBP13.27□□□□□ -0.29
NME3-201ENST00000219302 TNFAIP6P98066 277 aaPredicted RBP13.27□□□□□ -0.29
NME3-201ENST00000219302 ENDOGQ14249 297 aaKnown RBP13.27□□□□□ -0.29
NME3-201ENST00000219302 TAF11Q15544 211 aa13.27□□□□□ -0.29
NME3-201ENST00000219302 TMEM155Q4W5P6 130 aa13.27□□□□□ -0.29
NME3-201ENST00000219302 AGBL2Q5U5Z8 902 aa13.27□□□□□ -0.29
NME3-201ENST00000219302 NANOGP8Q6NSW7 305 aa13.27□□□□□ -0.29
NME3-201ENST00000219302 ZNF774Q6NX45 483 aa13.27□□□□□ -0.29
NME3-201ENST00000219302 Q6ZR03 302 aa13.27□□□□□ -0.29
NME3-201ENST00000219302 CALHM3Q86XJ0 350 aa13.27□□□□□ -0.29
NME3-201ENST00000219302 LRRC75AQ8NAA5 344 aa13.27□□□□□ -0.29
NME3-201ENST00000219302 SAMD8Q96LT4 415 aa13.27□□□□□ -0.29
NME3-201ENST00000219302 RBP7Q96R05 134 aa13.27□□□□□ -0.29
NME3-201ENST00000219302 GPA33Q99795 319 aa13.27□□□□□ -0.29
NME3-201ENST00000219302 ELOVL3Q9HB03 270 aa13.27□□□□□ -0.29
NME3-201ENST00000219302 MED31Q9Y3C7 131 aa13.27□□□□□ -0.29
NME3-201ENST00000219302 GMNCA6NCL1 334 aa13.26□□□□□ -0.29
NME3-201ENST00000219302 A8MXK9 166 aa13.26□□□□□ -0.29
NME3-201ENST00000219302 F5H0A9 414 aaPredicted RBP13.26□□□□□ -0.29
NME3-201ENST00000219302 FBP2O00757 339 aa13.26□□□□□ -0.29
NME3-201ENST00000219302 SHOX2O60902 331 aaPredicted RBP13.26□□□□□ -0.29
NME3-201ENST00000219302 THRBP10828 461 aa13.26□□□□□ -0.29
NME3-201ENST00000219302 NR2C1P13056 603 aa13.26□□□□□ -0.29
NME3-201ENST00000219302 ARHGDIAP52565 204 aa13.26□□□□□ -0.29
NME3-201ENST00000219302 PAX8Q06710 450 aa13.26□□□□□ -0.29
NME3-201ENST00000219302 ALG10Q5BKT4 473 aa13.26□□□□□ -0.29
NME3-201ENST00000219302 ZMAT1Q5H9K5 638 aa13.26□□□□□ -0.29
NME3-201ENST00000219302 ARMCX4Q5H9R4 360 aa13.26□□□□□ -0.29
NME3-201ENST00000219302 SYT9Q86SS6 491 aa13.26□□□□□ -0.29
NME3-201ENST00000219302 SPICQ8N5J4 248 aa13.26□□□□□ -0.29
NME3-201ENST00000219302 FNDC8Q8TC99 324 aa13.26□□□□□ -0.29
NME3-201ENST00000219302 SIGLEC11Q96RL6 698 aa13.26□□□□□ -0.29
NME3-201ENST00000219302 POFUT1Q9H488 388 aa13.26□□□□□ -0.29
NME3-201ENST00000219302 ZMAT3Q9HA38 289 aaKnown RBP13.26□□□□□ -0.29
NME3-201ENST00000219302 TBCCD1Q9NVR7 557 aa13.26□□□□□ -0.29
NME3-201ENST00000219302 BAG5Q9UL15 447 aa13.26□□□□□ -0.29
NME3-201ENST00000219302 TGP01266 2768 aa13.25□□□□□ -0.29
NME3-201ENST00000219302 TIMM8AO60220 97 aaPredicted RBP13.25□□□□□ -0.29
NME3-201ENST00000219302 RNASE1P07998 156 aaKnown RBP13.25□□□□□ -0.29
NME3-201ENST00000219302 COX5BP10606 129 aa13.25□□□□□ -0.29
NME3-201ENST00000219302 FUT4P22083 530 aa13.25□□□□□ -0.29
NME3-201ENST00000219302 TUBG1P23258 451 aa13.25□□□□□ -0.29
NME3-201ENST00000219302 OR1E2P47887 323 aa13.25□□□□□ -0.29
NME3-201ENST00000219302 PCBD1P61457 104 aa13.25□□□□□ -0.29
NME3-201ENST00000219302 TOP3AQ13472 1001 aaPredicted RBP13.25□□□□□ -0.29
NME3-201ENST00000219302 FHL1Q13642 323 aa13.25□□□□□ -0.29
NME3-201ENST00000219302 ZMYND11Q15326 602 aa13.25□□□□□ -0.29
NME3-201ENST00000219302 RABL3Q5HYI8 236 aa13.25□□□□□ -0.29
NME3-201ENST00000219302 ZER1Q7Z7L7 766 aa13.25□□□□□ -0.29
NME3-201ENST00000219302 KLHL36Q8N4N3 616 aa13.25□□□□□ -0.29
NME3-201ENST00000219302 UNKLQ9H9P5 680 aaKnown RBP13.25□□□□□ -0.29
NME3-201ENST00000219302 TUBG2Q9NRH3 451 aa13.25□□□□□ -0.29
NME3-201ENST00000219302 HTR3EA5X5Y0 456 aa13.24□□□□□ -0.29
NME3-201ENST00000219302 POM121CA8CG34 1229 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms