RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 BOD1Q96IK1 185 aa23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 CNN2Q99439 309 aaKnown RBP23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 CDADC1Q9BWV3 514 aa23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 KCNN2Q9H2S1 579 aa23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 MARCH7Q9H992 704 aa23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 C19orf84I3L1E1 186 aa23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 ZNF593O00488 134 aaPredicted RBP23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 DBTP11182 482 aaKnown RBP23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 SORDQ00796 357 aa23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 TAB1Q15750 504 aa23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 SLC36A2Q495M3 483 aa23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 TIMM23BQ5SRD1 257 aa23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 NANOS1Q8WY41 292 aaKnown RBP23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 ZC3HAV1LQ96H79 300 aaKnown RBP23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 ADGRL4Q9HBW9 690 aa23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 NOX3Q9HBY0 568 aa23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 CCNB1IP1Q9NPC3 277 aa23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 LHFPL6Q9Y693 200 aa23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 TENM4Q6N022 2769 aa23.8■■□□□ 1.4
CHMP4B-201ENST00000217402 C12orf71A8MTZ7 269 aa23.8■■□□□ 1.4
CHMP4B-201ENST00000217402 ATP6V1E1P36543 226 aa23.8■■□□□ 1.4
CHMP4B-201ENST00000217402 MED18Q9BUE0 208 aa23.8■■□□□ 1.4
CHMP4B-201ENST00000217402 RNF121Q9H920 327 aa23.8■■□□□ 1.4
CHMP4B-201ENST00000217402 HAO2Q9NYQ3 351 aa23.8■■□□□ 1.4
CHMP4B-201ENST00000217402 UBAP1Q9NZ09 502 aa23.8■■□□□ 1.4
CHMP4B-201ENST00000217402 AMDHD2Q9Y303 409 aa23.8■■□□□ 1.4
CHMP4B-201ENST00000217402 ARPC4-TTLL3A0A0A6YYG9 625 aa23.79■■□□□ 1.4
CHMP4B-201ENST00000217402 ZNF32P17041 273 aa23.79■■□□□ 1.4
CHMP4B-201ENST00000217402 TMED1Q13445 227 aa23.79■■□□□ 1.4
CHMP4B-201ENST00000217402 AQP6Q13520 282 aa23.79■■□□□ 1.4
CHMP4B-201ENST00000217402 DPY19L4Q7Z388 723 aa23.79■■□□□ 1.4
CHMP4B-201ENST00000217402 P2RY8Q86VZ1 359 aa23.79■■□□□ 1.4
CHMP4B-201ENST00000217402 BPIFB6Q8NFQ5 453 aa23.79■■□□□ 1.4
CHMP4B-201ENST00000217402 MUCL1Q96DR8 90 aa23.79■■□□□ 1.4
CHMP4B-201ENST00000217402 WFIKKN1Q96NZ8 548 aa23.79■■□□□ 1.4
CHMP4B-201ENST00000217402 C1QTNF6Q9BXI9 259 aa23.79■■□□□ 1.4
CHMP4B-201ENST00000217402 OR10A4Q9H209 315 aa23.79■■□□□ 1.4
CHMP4B-201ENST00000217402 RPL36Q9Y3U8 105 aaKnown RBP23.79■■□□□ 1.4
CHMP4B-201ENST00000217402 SLC25A15Q9Y619 301 aa23.79■■□□□ 1.4
CHMP4B-201ENST00000217402 HELZ2Q9BYK8 2649 aaKnown RBP23.78■■□□□ 1.4
CHMP4B-201ENST00000217402 XPNPEP2O43895 674 aa23.78■■□□□ 1.4
CHMP4B-201ENST00000217402 UBL3O95164 117 aa23.78■■□□□ 1.4
CHMP4B-201ENST00000217402 HOXB1P14653 301 aaPredicted RBP23.78■■□□□ 1.4
CHMP4B-201ENST00000217402 HCCSP53701 268 aa23.78■■□□□ 1.4
CHMP4B-201ENST00000217402 MED21Q13503 144 aa23.78■■□□□ 1.4
CHMP4B-201ENST00000217402 PPA1Q15181 289 aa23.78■■□□□ 1.4
CHMP4B-201ENST00000217402 GSG1Q2KHT4 349 aa23.78■■□□□ 1.4
CHMP4B-201ENST00000217402 C6orf141Q5SZD1 244 aa23.78■■□□□ 1.4
CHMP4B-201ENST00000217402 SLC16A9Q7RTY1 509 aa23.78■■□□□ 1.4
CHMP4B-201ENST00000217402 MDP1Q86V88 176 aa23.78■■□□□ 1.4
CHMP4B-201ENST00000217402 CCDC36Q8IYA8 594 aa23.78■■□□□ 1.4
CHMP4B-201ENST00000217402 OR4F15Q8NGB8 312 aa23.78■■□□□ 1.4
CHMP4B-201ENST00000217402 LINC01560Q8TB33 94 aa23.78■■□□□ 1.4
CHMP4B-201ENST00000217402 RHNO1Q9BSD3 238 aa23.78■■□□□ 1.4
CHMP4B-201ENST00000217402 CYB5R1Q9UHQ9 305 aa23.78■■□□□ 1.4
CHMP4B-201ENST00000217402 KCNG2Q9UJ96 466 aa23.78■■□□□ 1.4
CHMP4B-201ENST00000217402 LRRC42Q9Y546 428 aa23.78■■□□□ 1.4
CHMP4B-201ENST00000217402 ADGRG4Q8IZF6 3080 aa23.78■■□□□ 1.4
CHMP4B-201ENST00000217402 HCFC1P51610 2035 aa23.78■■□□□ 1.4
CHMP4B-201ENST00000217402 LRRK2Q5S007 2527 aa23.78■■□□□ 1.4
CHMP4B-201ENST00000217402 FAM20BO75063 409 aa23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 MMP7P09237 267 aaPredicted RBP23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 SBK2P0C263 348 aa23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 POU4F2Q12837 409 aa23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 OR2AJ1Q8NGZ0 328 aa23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 HSD17B8Q92506 261 aa23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 LGALS12Q96DT0 336 aa23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 USB1Q9BQ65 265 aaKnown RBP23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 OBP2BQ9NPH6 170 aa23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 B3GNT2Q9NY97 397 aa23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 A1L4Q6 167 aa23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 TUBAL3A6NHL2 446 aa23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 RER1O15258 196 aa23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 TMCC2O75069 709 aa23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 WNT11O96014 354 aa23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 PPP3CBP16298 524 aa23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 PCBD1P61457 104 aa23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 RAB1AP62820 205 aa23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 SLC18B1Q6NT16 456 aa23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 TMEM154Q6P9G4 183 aa23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 WFDC8Q8IUA0 241 aa23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 ZNF786Q8N393 782 aa23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 NDRG3Q9UGV2 375 aa23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 GDF2Q9UK05 429 aaPredicted RBP23.77■■□□□ 1.4
CHMP4B-201ENST00000217402 RAB36O95755 333 aa23.76■■□□□ 1.39
CHMP4B-201ENST00000217402 THBDP07204 575 aa23.76■■□□□ 1.39
CHMP4B-201ENST00000217402 EIF2B1Q14232 305 aaKnown RBP23.76■■□□□ 1.39
CHMP4B-201ENST00000217402 PCK2Q16822 640 aa23.76■■□□□ 1.39
CHMP4B-201ENST00000217402 TEX30Q5JUR7 227 aa23.76■■□□□ 1.39
CHMP4B-201ENST00000217402 TMEM53Q6P2H8 277 aa23.76■■□□□ 1.39
CHMP4B-201ENST00000217402 CFAP77Q6ZQR2 320 aa23.76■■□□□ 1.39
CHMP4B-201ENST00000217402 DCXRQ7Z4W1 244 aa23.76■■□□□ 1.39
CHMP4B-201ENST00000217402 SLC35F2Q8IXU6 374 aa23.76■■□□□ 1.39
CHMP4B-201ENST00000217402 AKR7LQ8NHP1 331 aa23.76■■□□□ 1.39
CHMP4B-201ENST00000217402 TBX5Q99593 518 aa23.76■■□□□ 1.39
CHMP4B-201ENST00000217402 TIMM10BQ9Y5J6 103 aa23.76■■□□□ 1.39
CHMP4B-201ENST00000217402 KLF2Q9Y5W3 355 aaPredicted RBP23.76■■□□□ 1.39
CHMP4B-201ENST00000217402 PRSS44E7EML9 344 aa23.75■■□□□ 1.39
CHMP4B-201ENST00000217402 SLC1A7O00341 560 aa23.75■■□□□ 1.39
CHMP4B-201ENST00000217402 SCRN3Q0VDG4 424 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms