RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Ndufaf6A2AIL4 333 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr1255A2AUA4 310 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 Nlgn4lB0F2B4 945 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 Mrap2D3Z1Q2 207 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr547E9PXN3 311 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 Prl8a2O54832 240 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 AanatO88816 205 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 LplP11152 474 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 NfyaP23708 346 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 Uba1yP31254 1058 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 Slc16a11Q5NC32 447 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 Slc35a1Q61420 336 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 Drd1Q61616 446 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 Q80UB0 333 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 Vrk1Q80X41 440 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 Mgat4aQ812G0 535 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 Q8C784 167 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 Lrrn3Q8CBC6 707 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 Rhno1Q8K3A4 235 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 Vmn1r72Q8K3N7 306 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 Vmn1r48Q9EQ52 302 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 Slc2a8Q9JIF3 477 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 B4galt2Q9Z2Y2 369 aa11.75□□□□□ -0.53
Nup88-203ENSMUST00000108531 Nckap5E9QAE1 1909 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Fam71dD3YV92 440 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 4930595D18RikD3Z642 64 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Zfp820E9Q5G8 549 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Slc38a6G3UVW3 457 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Slc30a4O35149 430 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Clk1P22518 483 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Ggta1P23336 394 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Capza1P47753 286 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 NfkbidQ2TB02 327 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Zfp987Q32P14 633 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Cpeb4Q7TN98 729 aaKnown RBP11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr1286Q7TQY2 305 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr314Q7TRZ7 330 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Psmf1Q8BHL8 271 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Znf775Q8BI73 538 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 PcgF3Q8BTQ0 241 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Nob1Q8BW10 403 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Ube3dQ8BX13 368 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Fam221aQ8C790 301 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 BanpQ8VBU8 548 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr828Q8VFM8 312 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Nudt16l1Q8VHN8 211 aaKnown RBP11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Cdhr1Q8VHP6 859 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Elovl6Q920L5 267 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Lingo1Q9D1T0 614 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Moap1Q9ERH6 352 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 C1galt1Q9JJ06 363 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Kcne4Q9WTW3 170 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Alms1Q8K4E0 3251 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr576A0A0G2JFH3 312 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Ino80eA0A0U1RP99 260 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 6430628N08RikA0A0U1RQ45 177 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Igkv9-123A0A140T8N8 117 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Gpr155A2AWR3 868 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Vmn1r86L7N213 316 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Gm8857L7N291 182 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Fer1l5P0DM40 2038 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Gpd1P13707 349 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 GifP52787 417 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Csrp2P97314 193 aaKnown RBP11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Scand1Q2M4I6 142 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Them4Q3UUI3 230 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Mtcp1Q60945 107 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Cd55Q61475 390 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Zfp180Q6NZI9 655 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Lrit2Q6PFC5 549 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Phf21aQ6ZPK0 659 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr1134Q7TR43 312 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Gpr137Q80ZU9 396 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Slc35d3Q8BGF8 422 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Arfrp1Q8BXL7 201 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 Pmepa1Q9D7R2 260 aa11.74□□□□□ -0.53
Nup88-203ENSMUST00000108531 R3hdmlA2A5I3 253 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Tmem74bA2AU34 232 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Gm21560D3Z7A4 205 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Gm3099J3QPA5 205 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Speer4eK7N6S8 255 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 4930555G01RikL7N253 205 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Rbbp9O88851 186 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 H2-T23P06339 357 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Bpifa2P07743 235 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 CtgfP29268 348 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 CdaP56389 146 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Sec61a1P61620 476 aaKnown RBP11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Ypel5P62700 121 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Tmem217Q14AF1 189 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Akt2Q60823 481 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Spin2cQ6NVE3 257 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr1115Q7TR53 326 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr1031Q7TR87 336 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr967Q7TRA6 310 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr517Q7TRU4 314 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Agfg2Q80WC7 479 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Znf8Q8BGV5 572 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Cnppd1Q8K158 407 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Pom121Q8K3Z9 1200 aa11.73□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms