RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Igkv6-20A0A140T8P2 115 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 DytnA2CI98 653 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 9330182O14RikJ3QNB2 140 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 SgceO70258 437 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Fcgr2P08101 330 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 RetP35546 1115 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Otop1Q80VM9 600 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Mboat1Q8BH98 492 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Esco2Q8CIB9 592 aaKnown RBP10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Dusp7Q91Z46 422 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Cdca3Q99M54 266 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 PinlypQ9CQD7 212 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Alyref2Q9JJW6 218 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Tbl2Q9R099 442 aaKnown RBP10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Unc13cQ8K0T7 2210 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Cacng2O88602 323 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 RidaP52760 135 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Guk1Q64520 198 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Nox3Q672J9 568 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Zfp82Q6P9Y7 530 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Olfr201Q7TS38 308 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Serinc5Q8BHJ6 461 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Glipr2Q9CYL5 154 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Cln8Q9QUK3 288 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 MokQ9WVS4 420 aa10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 HnrnpfQ9Z2X1 415 aaKnown RBP10.86□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Gm30302A0A1Y7VN40 1110 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Xpnpep2B1AVD1 674 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Olfr417F8VQB1 309 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 NnmtO55239 264 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 CtgfP29268 348 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 S1pr2P52592 352 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 AhrrQ3U1U7 701 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Zp3rQ60736 579 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Irgm1Q60766 409 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Clec9aQ8BRU4 238 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 CebpzosQ8BTE5 80 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Dnajc22Q8CHS2 339 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Pex13Q9D0K1 405 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Rasal1Q9Z268 799 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Olfr228A0A1L1SR98 313 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Timp1P12032 205 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Eif5aP63242 154 aaKnown RBP10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Zfp39Q02525 718 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Sqstm1Q64337 442 aaKnown RBP10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 A730049H05RikQ8C940 139 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Olfr1100Q8VFM1 321 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Slc25a46Q9CQS4 418 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Ca7Q9ERQ8 264 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Eny2Q9JIX0 101 aaKnown RBP10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Gm45716A0A1B0GRQ0 93 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Vmn1r9A2RST7 299 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Gm15737D3YZR0 106 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 MbpP04370 250 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Cox5bP19536 128 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Etv1P41164 477 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Gm5127Q3UQH6 212 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 NraddQ8CJ26 228 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Tmem246Q91YV9 403 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Etv5Q9CXC9 510 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Naalad2Q9CZR2 740 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Tlr1Q9EPQ1 795 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Fezf2Q9ESP5 455 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Olfr520E9Q518 316 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Nr1h5E9Q5A6 505 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Tcl1aP56280 116 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Olfr1321Q7TQW4 319 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Tspan12Q8BKT6 305 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Aifm2Q8BUE4 373 aa10.85□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Trbv21A0A0A6YX06 97 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Stpg3A2RSX4 306 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Vmn2r117K7N6V1 857 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Nfatc1O88942 717 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Pcmt1P23506 227 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Gsc2P56916 198 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Fxyd2Q04646 70 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Bhlha9Q5RJB0 231 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Zfp975Q6NVD6 525 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Endod1Q8C522 501 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Il17rcQ8K4C2 698 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Ptcd2Q8R3K3 381 aaKnown RBP10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Acox3Q9EPL9 700 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Akip1Q9JJR5 212 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 TsnaxQ9QZE7 290 aaKnown RBP10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Uchl1Q9R0P9 223 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 AicdaQ9WVE0 198 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Tmem196V9GX04 182 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Olfr889L7N1Y6 314 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 AlyrefO08583 255 aaKnown RBP10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Cd40P27512 289 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Cyb561Q60720 250 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Olfr9Q60885 312 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Slc17a1Q61983 465 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Olfr378Q8VGT2 314 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Lypd3Q91YK8 363 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Clint1Q99KN9 631 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Olfr71Q9QZ18 312 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Slc37a2Q9WU81 501 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Gm36864A0A1Y7VJE6 447 aa10.84□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Zmat3O54836 290 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms