RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 OR2M5A3KFT3 312 aa15.31■□□□□ 0.04
PHGDH-234ENST00000642041 OR5H15A6NDH6 313 aa15.31■□□□□ 0.04
PHGDH-234ENST00000642041 H3BML4 177 aa15.31■□□□□ 0.04
PHGDH-234ENST00000642041 ZIC3O60481 467 aa15.31■□□□□ 0.04
PHGDH-234ENST00000642041 ARL6IP5O75915 188 aa15.31■□□□□ 0.04
PHGDH-234ENST00000642041 AQP8O94778 261 aa15.31■□□□□ 0.04
PHGDH-234ENST00000642041 CD96P40200 585 aa15.31■□□□□ 0.04
PHGDH-234ENST00000642041 SIRPAP78324 504 aa15.31■□□□□ 0.04
PHGDH-234ENST00000642041 AQP6Q13520 282 aa15.31■□□□□ 0.04
PHGDH-234ENST00000642041 CDSNQ15517 529 aa15.31■□□□□ 0.04
PHGDH-234ENST00000642041 SLC25A25Q6KCM7 469 aa15.31■□□□□ 0.04
PHGDH-234ENST00000642041 SLC18B1Q6NT16 456 aa15.31■□□□□ 0.04
PHGDH-234ENST00000642041 OR14L1PQ8NHC6 308 aa15.31■□□□□ 0.04
PHGDH-234ENST00000642041 MCFD2Q8NI22 146 aa15.31■□□□□ 0.04
PHGDH-234ENST00000642041 ZNF524Q96C55 264 aa15.31■□□□□ 0.04
PHGDH-234ENST00000642041 ZMYND19Q96E35 227 aaPredicted RBP15.31■□□□□ 0.04
PHGDH-234ENST00000642041 JSRP1Q96MG2 331 aaPredicted RBP15.31■□□□□ 0.04
PHGDH-234ENST00000642041 GNRHR2Q96P88 292 aa15.31■□□□□ 0.04
PHGDH-234ENST00000642041 TAAR6Q96RI8 345 aa15.31■□□□□ 0.04
PHGDH-234ENST00000642041 FOXC2Q99958 501 aa15.31■□□□□ 0.04
PHGDH-234ENST00000642041 NXF2Q9GZY0 626 aaKnown RBP15.31■□□□□ 0.04
PHGDH-234ENST00000642041 OR51E2Q9H255 320 aa15.31■□□□□ 0.04
PHGDH-234ENST00000642041 TAS2R16Q9NYV7 291 aa15.31■□□□□ 0.04
PHGDH-234ENST00000642041 SH3BGRL2Q9UJC5 107 aa15.31■□□□□ 0.04
PHGDH-234ENST00000642041 SF3B6Q9Y3B4 125 aaKnown RBP15.31■□□□□ 0.04
PHGDH-234ENST00000642041 NSD1Q96L73 2696 aaPredicted RBP15.31■□□□□ 0.04
PHGDH-234ENST00000642041 METTL15A6NJ78 407 aa15.3■□□□□ 0.04
PHGDH-234ENST00000642041 COL6A5A8TX70 2615 aa15.3■□□□□ 0.04
PHGDH-234ENST00000642041 CLDN25C9JDP6 229 aa15.3■□□□□ 0.04
PHGDH-234ENST00000642041 RGS9O75916 674 aaPredicted RBP15.3■□□□□ 0.04
PHGDH-234ENST00000642041 HPNP05981 417 aa15.3■□□□□ 0.04
PHGDH-234ENST00000642041 FOSL1P15407 271 aa15.3■□□□□ 0.04
PHGDH-234ENST00000642041 MAPK3P27361 379 aaPredicted RBP15.3■□□□□ 0.04
PHGDH-234ENST00000642041 CASP6P55212 293 aa15.3■□□□□ 0.04
PHGDH-234ENST00000642041 H3F3AP84243 136 aa15.3■□□□□ 0.04
PHGDH-234ENST00000642041 ZNF45Q02386 682 aa15.3■□□□□ 0.04
PHGDH-234ENST00000642041 ZNF85Q03923 595 aa15.3■□□□□ 0.04
PHGDH-234ENST00000642041 INAQ16352 499 aa15.3■□□□□ 0.04
PHGDH-234ENST00000642041 LINC00696Q6ZRV3 163 aa15.3■□□□□ 0.04
PHGDH-234ENST00000642041 CDC20BQ86Y33 519 aa15.3■□□□□ 0.04
PHGDH-234ENST00000642041 KLBQ86Z14 1044 aa15.3■□□□□ 0.04
PHGDH-234ENST00000642041 TIGD4Q8IY51 512 aa15.3■□□□□ 0.04
PHGDH-234ENST00000642041 OR6V1Q8N148 313 aa15.3■□□□□ 0.04
PHGDH-234ENST00000642041 ACOT12Q8WYK0 555 aa15.3■□□□□ 0.04
PHGDH-234ENST00000642041 C4orf36Q96KX1 117 aa15.3■□□□□ 0.04
PHGDH-234ENST00000642041 KCNK17Q96T54 332 aa15.3■□□□□ 0.04
PHGDH-234ENST00000642041 WACQ9BTA9 647 aa15.3■□□□□ 0.04
PHGDH-234ENST00000642041 NUAK2Q9H093 628 aa15.3■□□□□ 0.04
PHGDH-234ENST00000642041 SYT4Q9H2B2 425 aa15.3■□□□□ 0.04
PHGDH-234ENST00000642041 TXNL4BQ9NX01 149 aaKnown RBP15.3■□□□□ 0.04
PHGDH-234ENST00000642041 OR6C65A6NJZ3 312 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 J3QLW9 94 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 ACOT7O00154 380 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 EFNA2O43921 213 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 SLC16A7O60669 478 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 IFNGR1P15260 489 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 ZNF19P17023 458 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 MTNR1BP49286 362 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 RPS3AP61247 264 aaKnown RBP15.29■□□□□ 0.04
PHGDH-234ENST00000642041 NCS1P62166 190 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 POU3F1Q03052 451 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-234ENST00000642041 RBPJQ06330 500 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 RASGEF1BQ0VAM2 473 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 TOMM20Q15388 145 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 OR1C1Q15619 314 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 DMKNQ6E0U4 476 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-234ENST00000642041 MEX3BQ6ZN04 569 aaKnown RBP15.29■□□□□ 0.04
PHGDH-234ENST00000642041 SLC22A16Q86VW1 577 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 OTOSQ8NHW6 89 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 SPATA3Q8NHX4 192 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 TBC1D15Q8TC07 691 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 CPNE4Q96A23 557 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-234ENST00000642041 SMIM19Q96E16 107 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 SFXN2Q96NB2 322 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 MRI1Q9BV20 369 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 MROQ9BYG7 248 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 DLL4Q9NR61 685 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 CPAMD8Q8IZJ3 1885 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 STAB1Q9NY15 2570 aa15.29■□□□□ 0.04
PHGDH-234ENST00000642041 AKAP6Q13023 2319 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 PCNX3Q9H6A9 2034 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 GPX5O75715 221 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 SERPINI2O75830 405 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 AKR7A3O95154 331 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 WDPCPO95876 746 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 ACTL6AO96019 429 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 HLA-DQA2P01906 255 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 GYPBP06028 91 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 SP1P08047 785 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 CLUP10909 449 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 ALOX5APP20292 161 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 ENPP1P22413 925 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 DCTDP32321 178 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 PYCR1P32322 319 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 ENTPD1P49961 510 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 PSMD7P51665 324 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 CLRN1P58418 232 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 LSM3P62310 102 aaKnown RBP15.28■□□□□ 0.04
PHGDH-234ENST00000642041 ARG2P78540 354 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 YIF1BQ5BJH7 314 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms