RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 SNAP29O95721 258 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 CST2P09228 141 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 CCL2P13500 99 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 ZNF32P17041 273 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 APEX1P27695 318 aaKnown RBP12.95□□□□□ -0.34
PHGDH-231ENST00000641939 LAP3P28838 519 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 SDHAP31040 664 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 APLNRP35414 380 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 IFNGR2P38484 337 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 FXYD6P3P58550 94 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 MS4A2Q01362 244 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 KRR1Q13601 381 aaKnown RBP12.95□□□□□ -0.34
PHGDH-231ENST00000641939 MSMPQ1L6U9 139 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 PABPC1L2AQ5JQF8 200 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 SMARCD3Q6STE5 483 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 DPY19L2P2Q6ZN68 376 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 TRPM8Q7Z2W7 1104 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 PAQR4Q8N4S7 273 aaPredicted RBP12.95□□□□□ -0.34
PHGDH-231ENST00000641939 FANK1Q8TC84 345 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 RASD2Q96D21 266 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 MRPL37Q9BZE1 423 aaKnown RBP12.95□□□□□ -0.34
PHGDH-231ENST00000641939 MAGIXQ9H6Y5 334 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 DYNLRB1Q9NP97 96 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 JMJD1CQ15652 2540 aa12.95□□□□□ -0.34
PHGDH-231ENST00000641939 ERCC1P07992 297 aaPredicted RBP12.94□□□□□ -0.34
PHGDH-231ENST00000641939 SLC25A16P16260 332 aa12.94□□□□□ -0.34
PHGDH-231ENST00000641939 MSR1P21757 451 aa12.94□□□□□ -0.34
PHGDH-231ENST00000641939 FPR3P25089 353 aa12.94□□□□□ -0.34
PHGDH-231ENST00000641939 MAGEA2P43356 314 aa12.94□□□□□ -0.34
PHGDH-231ENST00000641939 PDLIM4P50479 330 aa12.94□□□□□ -0.34
PHGDH-231ENST00000641939 RPS6KA3P51812 740 aa12.94□□□□□ -0.34
PHGDH-231ENST00000641939 HMGA2P52926 109 aa12.94□□□□□ -0.34
PHGDH-231ENST00000641939 PCBD1P61457 104 aa12.94□□□□□ -0.34
PHGDH-231ENST00000641939 ADCK1Q86TW2 530 aa12.94□□□□□ -0.34
PHGDH-231ENST00000641939 C10orf105Q8TEF2 133 aa12.94□□□□□ -0.34
PHGDH-231ENST00000641939 POP5Q969H6 163 aaKnown RBP12.94□□□□□ -0.34
PHGDH-231ENST00000641939 MYOZ1Q9NP98 299 aaPredicted RBP12.94□□□□□ -0.34
PHGDH-231ENST00000641939 POLE4Q9NR33 117 aa12.94□□□□□ -0.34
PHGDH-231ENST00000641939 VSX1Q9NZR4 365 aaPredicted RBP12.94□□□□□ -0.34
PHGDH-231ENST00000641939 IER3IP1Q9Y5U9 82 aa12.94□□□□□ -0.34
PHGDH-231ENST00000641939 LYVE1Q9Y5Y7 322 aa12.94□□□□□ -0.34
PHGDH-231ENST00000641939 SOCS2O14508 198 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 SYNGR3O43761 229 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 TXNDC12O95881 172 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 ADRA2AP08913 450 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 FAM157BP0CG42 384 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 APEHP13798 732 aaKnown RBP12.93□□□□□ -0.34
PHGDH-231ENST00000641939 CTLA4P16410 223 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 STOMP27105 288 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 PCSK6P29122 969 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 GSSP48637 474 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 PSG4Q00888 419 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 ENDOGQ14249 297 aaKnown RBP12.93□□□□□ -0.34
PHGDH-231ENST00000641939 RFX4Q33E94 735 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 RGS7BPQ6MZT1 257 aaPredicted RBP12.93□□□□□ -0.34
PHGDH-231ENST00000641939 C1orf94Q6P1W5 598 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 SYT9Q86SS6 491 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 ZCCHC24Q8N2G6 241 aaKnown RBP12.93□□□□□ -0.34
PHGDH-231ENST00000641939 LINC00471Q8N535 108 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 CPEB3Q8NE35 698 aaKnown RBP12.93□□□□□ -0.34
PHGDH-231ENST00000641939 AKR7LQ8NHP1 331 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 GNPDA2Q8TDQ7 276 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 NEU4Q8WWR8 484 aaPredicted RBP12.93□□□□□ -0.34
PHGDH-231ENST00000641939 CCDC124Q96CT7 223 aaKnown RBP12.93□□□□□ -0.34
PHGDH-231ENST00000641939 ASB9Q96DX5 294 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 CLPTM1LQ96KA5 538 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 SYT3Q9BQG1 590 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 THTPAQ9BU02 230 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 ZNF416Q9BWM5 594 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 OR2H1Q9GZK4 316 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 WNT5BQ9H1J7 359 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 SYT4Q9H2B2 425 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 OR52D1Q9H346 318 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 FZR1Q9UM11 496 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 TIMM10BQ9Y5J6 103 aa12.93□□□□□ -0.34
PHGDH-231ENST00000641939 ABCA2Q9BZC7 2435 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 A0A096LNT2 108 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 C12orf71A8MTZ7 269 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 M0R233 179 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 TNFRSF11BO00300 401 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 IMPA2O14732 288 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 SLC16A7O60669 478 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 KHDRBS3O75525 346 aaKnown RBP12.92□□□□□ -0.34
PHGDH-231ENST00000641939 UBOX5O94941 541 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 STAMBPO95630 424 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 PPP1R3DO95685 299 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 SCG5P05408 212 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 LCKP06239 509 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 HOXB4P17483 251 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-231ENST00000641939 CCNOP22674 350 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 SLC6A6P31641 620 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 RAD52P43351 418 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 GDI2P50395 445 aaKnown RBP12.92□□□□□ -0.34
PHGDH-231ENST00000641939 UCP2P55851 309 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 KRTAP1-1Q07627 177 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 TSPAN31Q12999 210 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 FAM98BQ52LJ0 330 aaKnown RBP12.92□□□□□ -0.34
PHGDH-231ENST00000641939 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.92□□□□□ -0.34
PHGDH-231ENST00000641939 PGBD2Q6P3X8 592 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 PTCHD4Q6ZW05 846 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms