RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 NANOS1Q8WY41 292 aaKnown RBP11.5□□□□□ -0.57
GTF3A-209ENST00000640289 C11orf40Q8WZ69 217 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 PTP4A1Q93096 173 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 OTULINQ96BN8 352 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 FBXO17Q96EF6 278 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 C14orf79Q96F83 325 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 PLEKHA8Q96JA3 519 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 ZNF75AQ96N20 296 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 MBOAT4Q96T53 435 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 ZNF416Q9BWM5 594 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 TOR3AQ9H497 397 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 NGBQ9NPG2 151 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 HINT3Q9NQE9 182 aaKnown RBP11.5□□□□□ -0.57
GTF3A-209ENST00000640289 RASSF1Q9NS23 344 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 ORC6Q9Y5N6 252 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 IGHV1-18A0A0C4DH31 117 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 TVP23AA6NH52 213 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 PRR23D1E9PI22 279 aaPredicted RBP11.49□□□□□ -0.57
GTF3A-209ENST00000640289 CASQ2O14958 399 aaPredicted RBP11.49□□□□□ -0.57
GTF3A-209ENST00000640289 PRKYO43930 277 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 MGRN1O60291 552 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 CTAG2O75638 210 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 UBL3O95164 117 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 PLAUP00749 431 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 IGKV3-15P01624 115 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 TFP02787 698 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 CST2P09228 141 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 MMP7P09237 267 aaPredicted RBP11.49□□□□□ -0.57
GTF3A-209ENST00000640289 PRR23D2P0DMB1 279 aaPredicted RBP11.49□□□□□ -0.57
GTF3A-209ENST00000640289 ZNF32P17041 273 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 IDH3GP51553 393 aaPredicted RBP11.49□□□□□ -0.57
GTF3A-209ENST00000640289 SLC25A1P53007 311 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 SLC34A1Q06495 639 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 SLC36A2Q495M3 483 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 OGFRL1Q5TC84 451 aaPredicted RBP11.49□□□□□ -0.57
GTF3A-209ENST00000640289 FBXW10Q5XX13 1052 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 SSX8Q7RTT4 187 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 BCDIN3DQ7Z5W3 292 aaKnown RBP11.49□□□□□ -0.57
GTF3A-209ENST00000640289 TMEM200AQ86VY9 491 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 CPOQ8IVL8 374 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 BBS1Q8NFJ9 593 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 OR2T4Q8NH00 348 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 MS4A3Q96HJ5 214 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 SLC38A2Q96QD8 506 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 TEX12Q9BXU0 123 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 GRIP2Q9C0E4 1043 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 OR51V1Q9H2C8 321 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 RNF121Q9H920 327 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 RNPEPL1Q9HAU8 725 aa11.49□□□□□ -0.57
GTF3A-209ENST00000640289 MRPL22Q9NWU5 206 aaKnown RBP11.49□□□□□ -0.57
GTF3A-209ENST00000640289 CRNNQ9UBG3 495 aaPredicted RBP11.49□□□□□ -0.57
GTF3A-209ENST00000640289 ADGRG4Q8IZF6 3080 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 NBPF19A0A087WUL8 3843 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 E9PQ18 207 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 DLGAP1O14490 977 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 RAB36O95755 333 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 IGLV1-44P01699 117 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 HLA-DQA2P01906 255 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 CECR9P0C854 216 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 PAICSP22234 425 aaKnown RBP11.48□□□□□ -0.57
GTF3A-209ENST00000640289 CD40P25942 277 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 ARR3P36575 388 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 KRTAP10-9P60411 292 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 HSF2Q03933 536 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 GLO1Q04760 184 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 RAB39AQ14964 217 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 C1QTNF12Q5T7M4 302 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 LINC01590Q5TEZ4 76 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 TMEM108Q6UXF1 575 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 CXXC5Q7LFL8 322 aaKnown RBP11.48□□□□□ -0.57
GTF3A-209ENST00000640289 ZNF584Q8IVC4 421 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 TCEANCQ8N8B7 351 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 ZNF511Q8NB15 262 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 SLC26A10Q8NG04 563 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 NRG4Q8WWG1 115 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 IL4I1Q96RQ9 567 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 KCNN2Q9H2S1 579 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 ESRP2Q9H6T0 727 aaKnown RBP11.48□□□□□ -0.57
GTF3A-209ENST00000640289 CCNB1IP1Q9NPC3 277 aa11.48□□□□□ -0.57
GTF3A-209ENST00000640289 RRP15Q9Y3B9 282 aaKnown RBP11.48□□□□□ -0.57
GTF3A-209ENST00000640289 SPTAN1Q13813 2472 aaKnown RBP11.48□□□□□ -0.57
GTF3A-209ENST00000640289 ABCD4O14678 606 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 TLX2O43763 284 aaPredicted RBP11.47□□□□□ -0.57
GTF3A-209ENST00000640289 GOSR1O95249 250 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 CD3EP07766 207 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 PSKH1P11801 424 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 ZNF14P17017 642 aaPredicted RBP11.47□□□□□ -0.57
GTF3A-209ENST00000640289 PTAFRP25105 342 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 SSTR2P30874 369 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 CALCRP30988 508 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 RPS27P42677 84 aaKnown RBP11.47□□□□□ -0.57
GTF3A-209ENST00000640289 NR1H2P55055 460 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 EFNB1P98172 346 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 PSG4Q00888 419 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 TEKQ02763 1124 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 KCNMB1Q16558 191 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 KLHL12Q53G59 568 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 PABPC1L2AQ5JQF8 200 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 ADAM5Q6NVV9 412 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 TMEM53Q6P2H8 277 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms