RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 ENDOGQ14249 297 aaKnown RBP18.84■□□□□ 0.61
SCN1B-206ENST00000638536 MST1LQ2TV78 715 aa18.84■□□□□ 0.61
SCN1B-206ENST00000638536 SLC36A2Q495M3 483 aa18.84■□□□□ 0.61
SCN1B-206ENST00000638536 C1orf146Q5VVC0 180 aa18.84■□□□□ 0.61
SCN1B-206ENST00000638536 KRT80Q6KB66 452 aa18.84■□□□□ 0.61
SCN1B-206ENST00000638536 RASSF6Q6ZTQ3 369 aa18.84■□□□□ 0.61
SCN1B-206ENST00000638536 CCDC121Q6ZUS5 278 aa18.84■□□□□ 0.61
SCN1B-206ENST00000638536 CPEB3Q8NE35 698 aaKnown RBP18.84■□□□□ 0.61
SCN1B-206ENST00000638536 GIPC3Q8TF64 312 aa18.84■□□□□ 0.61
SCN1B-206ENST00000638536 GSX2Q9BZM3 304 aa18.84■□□□□ 0.61
SCN1B-206ENST00000638536 EMC7Q9NPA0 242 aa18.84■□□□□ 0.61
SCN1B-206ENST00000638536 COA3Q9Y2R0 106 aaPredicted RBP18.84■□□□□ 0.61
SCN1B-206ENST00000638536 APOBEC3AP31941 199 aaPredicted RBP18.83■□□□□ 0.61
SCN1B-206ENST00000638536 MSMPQ1L6U9 139 aa18.83■□□□□ 0.61
SCN1B-206ENST00000638536 ZNF544Q6NX49 715 aa18.83■□□□□ 0.61
SCN1B-206ENST00000638536 LEG1Q6P5S2 330 aa18.83■□□□□ 0.61
SCN1B-206ENST00000638536 ZNF416Q9BWM5 594 aa18.83■□□□□ 0.61
SCN1B-206ENST00000638536 FN3KQ9H479 309 aa18.83■□□□□ 0.61
SCN1B-206ENST00000638536 CXorf56Q9H5V9 222 aa18.83■□□□□ 0.61
SCN1B-206ENST00000638536 POLE4Q9NR33 117 aa18.83■□□□□ 0.61
SCN1B-206ENST00000638536 PDP1Q9P0J1 537 aaPredicted RBP18.83■□□□□ 0.61
SCN1B-206ENST00000638536 CHD3Q12873 2000 aaKnown RBP18.83■□□□□ 0.6
SCN1B-206ENST00000638536 AHCYL1O43865 530 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 PAX1P15863 534 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 THBS4P35443 961 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 ADIPOQQ15848 244 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 PABPC1L2AQ5JQF8 200 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 ZNF362Q5T0B9 420 aaPredicted RBP18.82■□□□□ 0.6
SCN1B-206ENST00000638536 AGAP6Q5VW22 663 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 ADCK1Q86TW2 530 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 OR6V1Q8N148 313 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 FBXL14Q8N1E6 418 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 LRRC75A-AS1Q8N1F1 130 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 SDR9C7Q8NEX9 313 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 OR4Q3Q8NH05 313 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 AKR7LQ8NHP1 331 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 SRA1Q9HD15 236 aaKnown RBP18.82■□□□□ 0.6
SCN1B-206ENST00000638536 CBLN4Q9NTU7 201 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 FAIMQ9NVQ4 179 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 ARMC1Q9NVT9 282 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 DNAJB9Q9UBS3 223 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 GDF2Q9UK05 429 aaPredicted RBP18.82■□□□□ 0.6
SCN1B-206ENST00000638536 OR6C68A6NDL8 312 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 GPRIN2O60269 458 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 APEX1P27695 318 aaKnown RBP18.82■□□□□ 0.6
SCN1B-206ENST00000638536 PSG4Q00888 419 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 Q5PR19 223 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 TMEM53Q6P2H8 277 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 NPEPL1Q8NDH3 523 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 NUP37Q8NFH4 326 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 OR52E2Q8NGJ4 325 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 DDOQ99489 341 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 TSSK6Q9BXA6 273 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 GRIP2Q9C0E4 1043 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 REV1Q9UBZ9 1251 aa18.82■□□□□ 0.6
SCN1B-206ENST00000638536 CST2P09228 141 aa18.81■□□□□ 0.6
SCN1B-206ENST00000638536 MSR1P21757 451 aa18.81■□□□□ 0.6
SCN1B-206ENST00000638536 NR4A1P22736 598 aa18.81■□□□□ 0.6
SCN1B-206ENST00000638536 NOS3P29474 1203 aa18.81■□□□□ 0.6
SCN1B-206ENST00000638536 SNTB2Q13425 540 aaKnown RBP18.81■□□□□ 0.6
SCN1B-206ENST00000638536 SLC30A7Q8NEW0 376 aa18.81■□□□□ 0.6
SCN1B-206ENST00000638536 IL17RDQ8NFM7 739 aa18.81■□□□□ 0.6
SCN1B-206ENST00000638536 OR4F15Q8NGB8 312 aa18.81■□□□□ 0.6
SCN1B-206ENST00000638536 CACNG6Q9BXT2 260 aa18.81■□□□□ 0.6
SCN1B-206ENST00000638536 WNT5BQ9H1J7 359 aa18.81■□□□□ 0.6
SCN1B-206ENST00000638536 RPRD1BQ9NQG5 326 aaKnown RBP18.81■□□□□ 0.6
SCN1B-206ENST00000638536 IGLV1-36A0A0B4J1U3 117 aa18.8■□□□□ 0.6
SCN1B-206ENST00000638536 FAM171A2A8MVW0 826 aa18.8■□□□□ 0.6
SCN1B-206ENST00000638536 EBAG9O00559 213 aa18.8■□□□□ 0.6
SCN1B-206ENST00000638536 ENTPD5O75356 428 aa18.8■□□□□ 0.6
SCN1B-206ENST00000638536 E2F6O75461 281 aa18.8■□□□□ 0.6
SCN1B-206ENST00000638536 KHDRBS3O75525 346 aaKnown RBP18.8■□□□□ 0.6
SCN1B-206ENST00000638536 OR4A8P0C604 315 aa18.8■□□□□ 0.6
SCN1B-206ENST00000638536 ATP5J2P56134 94 aa18.8■□□□□ 0.6
SCN1B-206ENST00000638536 DAG1Q14118 895 aa18.8■□□□□ 0.6
SCN1B-206ENST00000638536 MEP1BQ16820 701 aa18.8■□□□□ 0.6
SCN1B-206ENST00000638536 SWI5Q1ZZU3 235 aa18.8■□□□□ 0.6
SCN1B-206ENST00000638536 CD300LDQ6UXZ3 194 aa18.8■□□□□ 0.6
SCN1B-206ENST00000638536 JAZF1Q86VZ6 243 aa18.8■□□□□ 0.6
SCN1B-206ENST00000638536 CYB561A3Q8NBI2 242 aa18.8■□□□□ 0.6
SCN1B-206ENST00000638536 OR52L1Q8NGH7 329 aa18.8■□□□□ 0.6
SCN1B-206ENST00000638536 ZNRF4Q8WWF5 429 aa18.8■□□□□ 0.6
SCN1B-206ENST00000638536 YY1AP1Q9H869 796 aa18.8■□□□□ 0.6
SCN1B-206ENST00000638536 CCNB1IP1Q9NPC3 277 aa18.8■□□□□ 0.6
SCN1B-206ENST00000638536 TBC1D23Q9NUY8 699 aa18.8■□□□□ 0.6
SCN1B-206ENST00000638536 B9D1Q9UPM9 204 aa18.8■□□□□ 0.6
SCN1B-206ENST00000638536 ARRDC5A6NEK1 342 aa18.79■□□□□ 0.6
SCN1B-206ENST00000638536 IDH3BO43837 385 aa18.79■□□□□ 0.6
SCN1B-206ENST00000638536 HOXB6P17509 224 aaKnown RBP18.79■□□□□ 0.6
SCN1B-206ENST00000638536 SERPINF1P36955 418 aa18.79■□□□□ 0.6
SCN1B-206ENST00000638536 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.79■□□□□ 0.6
SCN1B-206ENST00000638536 GK3PQ14409 553 aa18.79■□□□□ 0.6
SCN1B-206ENST00000638536 SLC36A3Q495N2 470 aa18.79■□□□□ 0.6
SCN1B-206ENST00000638536 RPL13AP3Q6NVV1 102 aa18.79■□□□□ 0.6
SCN1B-206ENST00000638536 DPPA2Q7Z7J5 298 aa18.79■□□□□ 0.6
SCN1B-206ENST00000638536 TGIF2LYQ8IUE0 185 aa18.79■□□□□ 0.6
SCN1B-206ENST00000638536 OR2H1Q9GZK4 316 aa18.79■□□□□ 0.6
SCN1B-206ENST00000638536 KCNN2Q9H2S1 579 aa18.79■□□□□ 0.6
SCN1B-206ENST00000638536 OR51B6Q9H340 312 aa18.79■□□□□ 0.6
SCN1B-206ENST00000638536 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms