RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 CACNG2Q9Y698 323 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 GMNCA6NCL1 334 aa15.7■□□□□ 0.1
CLN6-220ENST00000637450 TPD52L2O43399 206 aaKnown RBP15.7■□□□□ 0.1
CLN6-220ENST00000637450 PLPP2O43688 288 aa15.7■□□□□ 0.1
CLN6-220ENST00000637450 AVPP01185 164 aa15.7■□□□□ 0.1
CLN6-220ENST00000637450 GCH1P30793 250 aa15.7■□□□□ 0.1
CLN6-220ENST00000637450 MPV17P39210 176 aa15.7■□□□□ 0.1
CLN6-220ENST00000637450 GDI2P50395 445 aaKnown RBP15.7■□□□□ 0.1
CLN6-220ENST00000637450 ZNF81P51508 661 aa15.7■□□□□ 0.1
CLN6-220ENST00000637450 MMP15P51511 669 aa15.7■□□□□ 0.1
CLN6-220ENST00000637450 RPL27P61353 136 aaKnown RBP15.7■□□□□ 0.1
CLN6-220ENST00000637450 SELENOWP63302 87 aa15.7■□□□□ 0.1
CLN6-220ENST00000637450 CD47Q08722 323 aa15.7■□□□□ 0.1
CLN6-220ENST00000637450 ST3GAL3Q11203 375 aa15.7■□□□□ 0.1
CLN6-220ENST00000637450 HFEQ30201 348 aa15.7■□□□□ 0.1
CLN6-220ENST00000637450 TMEM255AQ5JRV8 349 aa15.7■□□□□ 0.1
CLN6-220ENST00000637450 FAM209AQ5JX71 171 aa15.7■□□□□ 0.1
CLN6-220ENST00000637450 SPATA46Q5T0L3 261 aa15.7■□□□□ 0.1
CLN6-220ENST00000637450 MBNL2Q5VZF2 373 aaKnown RBP15.7■□□□□ 0.1
CLN6-220ENST00000637450 BPIFA2Q96DR5 249 aa15.7■□□□□ 0.1
CLN6-220ENST00000637450 WNT5BQ9H1J7 359 aa15.7■□□□□ 0.1
CLN6-220ENST00000637450 SAR1AQ9NR31 198 aa15.7■□□□□ 0.1
CLN6-220ENST00000637450 LOC100653049A0A140TA62 436 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 FAM220BPB1ANY3 271 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 CLDN25C9JDP6 229 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 KRT34O76011 436 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 MPZL1O95297 269 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 IGHV1-46P01743 117 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 IGHMP01871 453 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 CST2P09228 141 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 IFI30P13284 250 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 ARFIP2P53365 341 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 ERVK-25P63136 954 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 TOP3AQ13472 1001 aaPredicted RBP15.69■□□□□ 0.1
CLN6-220ENST00000637450 MAPRE2Q15555 327 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 LRRC23Q53EV4 343 aaPredicted RBP15.69■□□□□ 0.1
CLN6-220ENST00000637450 UNQ6126/PRO20091Q6UXV3 157 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 THSD4Q6ZMP0 1018 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 C1orf174Q8IYL3 243 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 TEX29Q8N6K0 151 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 CLDN22Q8N7P3 220 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 LRRC75AQ8NAA5 344 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 SLC25A40Q8TBP6 338 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 FNDC8Q8TC99 324 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 KLF14Q8TD94 323 aaPredicted RBP15.69■□□□□ 0.1
CLN6-220ENST00000637450 ZNF418Q8TF45 676 aaPredicted RBP15.69■□□□□ 0.1
CLN6-220ENST00000637450 IPCEF1Q8WWN9 437 aaPredicted RBP15.69■□□□□ 0.1
CLN6-220ENST00000637450 RAB1CQ92928 201 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 RAB39BQ96DA2 213 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 TPD52L3Q96J77 140 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 PRRC1Q96M27 445 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 OR2H1Q9GZK4 316 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 OR2J1Q9GZK6 312 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 GID8Q9NWU2 228 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 TIMM10BQ9Y5J6 103 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 TENM1Q9UKZ4 2725 aa15.69■□□□□ 0.1
CLN6-220ENST00000637450 SPRY3O43610 288 aa15.68■□□□□ 0.1
CLN6-220ENST00000637450 ICMTO60725 284 aa15.68■□□□□ 0.1
CLN6-220ENST00000637450 IGHV2-5P01817 119 aa15.68■□□□□ 0.1
CLN6-220ENST00000637450 TROVE2P10155 538 aaKnown RBP eCLIP15.68■□□□□ 0.1
CLN6-220ENST00000637450 MAKP20794 623 aa15.68■□□□□ 0.1
CLN6-220ENST00000637450 FUT4P22083 530 aa15.68■□□□□ 0.1
CLN6-220ENST00000637450 LAP3P28838 519 aa15.68■□□□□ 0.1
CLN6-220ENST00000637450 CTXN1P60606 82 aa15.68■□□□□ 0.1
CLN6-220ENST00000637450 FHL1Q13642 323 aa15.68■□□□□ 0.1
CLN6-220ENST00000637450 C12orf54Q6X4T0 127 aa15.68■□□□□ 0.1
CLN6-220ENST00000637450 FOXL2NBQ6ZUU3 175 aa15.68■□□□□ 0.1
CLN6-220ENST00000637450 USP43Q70EL4 1123 aa15.68■□□□□ 0.1
CLN6-220ENST00000637450 ALDH16A1Q8IZ83 802 aa15.68■□□□□ 0.1
CLN6-220ENST00000637450 PCYOX1LQ8NBM8 494 aa15.68■□□□□ 0.1
CLN6-220ENST00000637450 OR2T12Q8NG77 320 aa15.68■□□□□ 0.1
CLN6-220ENST00000637450 ELMOD3Q96FG2 381 aa15.68■□□□□ 0.1
CLN6-220ENST00000637450 TIMD4Q96H15 378 aa15.68■□□□□ 0.1
CLN6-220ENST00000637450 KLHL21Q9UJP4 597 aa15.68■□□□□ 0.1
CLN6-220ENST00000637450 LOC105371242A0A075B767 164 aa15.67■□□□□ 0.1
CLN6-220ENST00000637450 PLSCR5A0PG75 271 aa15.67■□□□□ 0.1
CLN6-220ENST00000637450 NGFP01138 241 aa15.67■□□□□ 0.1
CLN6-220ENST00000637450 ADH4P08319 380 aa15.67■□□□□ 0.1
CLN6-220ENST00000637450 IFNA8P32881 189 aa15.67■□□□□ 0.1
CLN6-220ENST00000637450 LIPAP38571 399 aa15.67■□□□□ 0.1
CLN6-220ENST00000637450 GUCA1AP43080 201 aaPredicted RBP15.67■□□□□ 0.1
CLN6-220ENST00000637450 PCBD1P61457 104 aa15.67■□□□□ 0.1
CLN6-220ENST00000637450 FAM205BPQ63HN1 556 aa15.67■□□□□ 0.1
CLN6-220ENST00000637450 RFPL4BQ6ZWI9 263 aa15.67■□□□□ 0.1
CLN6-220ENST00000637450 IGFN1Q86VF2 1251 aa15.67■□□□□ 0.1
CLN6-220ENST00000637450 MICU2Q8IYU8 434 aa15.67■□□□□ 0.1
CLN6-220ENST00000637450 CCL17Q92583 94 aa15.67■□□□□ 0.1
CLN6-220ENST00000637450 TMPRSS13Q9BYE2 586 aa15.67■□□□□ 0.1
CLN6-220ENST00000637450 CYSLTR2Q9NS75 346 aa15.67■□□□□ 0.1
CLN6-220ENST00000637450 MAN2C1Q9NTJ4 1040 aa15.67■□□□□ 0.1
CLN6-220ENST00000637450 PCDHB10Q9UN67 800 aa15.67■□□□□ 0.1
CLN6-220ENST00000637450 A0A0G2JMP0 313 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 A0A0X1KG70 313 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 ELOVL7A1L3X0 281 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 ZSCAN5BA6NJL1 495 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 UBOX5O94941 541 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 H2AFXP16104 143 aaPredicted RBP15.66■□□□□ 0.1
CLN6-220ENST00000637450 EPHA1P21709 976 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 CFPP27918 469 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 YAP1P46937 504 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms