RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 ZNF540Q8NDQ6 660 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 UBASH3BQ8TF42 649 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 C11orf40Q8WZ69 217 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 NABP1Q96AH0 204 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 NSL1Q96IY1 281 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 RSRC1Q96IZ7 334 aaKnown RBP11.88□□□□□ -0.51
PNKP-228ENST00000637325 Q96M85 177 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 TPK1Q9H3S4 243 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 MS4A5Q9H3V2 200 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 EIF3KQ9UBQ5 218 aaKnown RBP11.88□□□□□ -0.51
PNKP-228ENST00000637325 GPR160Q9UJ42 338 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 ADAM21Q9UKJ8 722 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 ADAM18Q9Y3Q7 739 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 A0A096LNT2 108 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 TRBV4-1A0A0J9YWV2 114 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 UNC119BA6NIH7 251 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 A8MV72 311 aaPredicted RBP11.87□□□□□ -0.51
PNKP-228ENST00000637325 B2RBV5 119 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 AHCYL1O43865 530 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 PTP4A3O75365 173 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 STAMBPO95630 424 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 FABP3P05413 133 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 CST2P09228 141 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 STOMP27105 288 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 LAP3P28838 519 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 ALDH3B1P43353 468 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 NR4A2P43354 598 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 OMPP47874 163 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 GDI2P50395 445 aaKnown RBP11.87□□□□□ -0.51
PNKP-228ENST00000637325 UCP2P55851 309 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 SEC23BQ15437 767 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 NKPD1Q17RQ9 610 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 SPATS1Q496A3 300 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 CYB5R2Q6BCY4 276 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 ALDH16A1Q8IZ83 802 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 AKR7LQ8NHP1 331 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 SYNPRQ8TBG9 265 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 BCL2L14Q9BZR8 327 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 TMCC3Q9ULS5 477 aa11.87□□□□□ -0.51
PNKP-228ENST00000637325 TEX13CA0A0J9YWL9 993 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 PRSS37A4D1T9 235 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 C5orf49A4QMS7 147 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 C12orf71A8MTZ7 269 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 VWC2LB2RUY7 222 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 SNAP29O95721 258 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 MSR1P21757 451 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 IFNGR2P38484 337 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 LIMS1P48059 325 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 RPS6KA3P51812 740 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 KLF3P57682 345 aaPredicted RBP11.86□□□□□ -0.51
PNKP-228ENST00000637325 PSG4Q00888 419 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 KRR1Q13601 381 aaKnown RBP11.86□□□□□ -0.51
PNKP-228ENST00000637325 MAD2L1BPQ15013 274 aaPredicted RBP11.86□□□□□ -0.51
PNKP-228ENST00000637325 ALKBH6Q3KRA9 238 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 GPR139Q6DWJ6 353 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 UNQ6126/PRO20091Q6UXV3 157 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 FITM2Q8N6M3 262 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 CCDC197Q8NCU1 140 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 CPEB3Q8NE35 698 aaKnown RBP11.86□□□□□ -0.51
PNKP-228ENST00000637325 SNX33Q8WV41 574 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 RASD2Q96D21 266 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 DHRS1Q96LJ7 313 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 RERGLQ9H628 205 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 TAAR3PQ9P1P4 343 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 MYEF2Q9P2K5 600 aaKnown RBP11.86□□□□□ -0.51
PNKP-228ENST00000637325 IL20RAQ9UHF4 553 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 SIGLEC7Q9Y286 467 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 TIMM10BQ9Y5J6 103 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 IER3IP1Q9Y5U9 82 aa11.86□□□□□ -0.51
PNKP-228ENST00000637325 SOCS2O14508 198 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 OR10H3O60404 316 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 CRLF1O75462 422 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 FAM107AO95990 144 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 SEMG1P04279 462 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 NAT2P11245 290 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 APEHP13798 732 aaKnown RBP11.85□□□□□ -0.51
PNKP-228ENST00000637325 ZNF26P17031 533 aaPredicted RBP11.85□□□□□ -0.51
PNKP-228ENST00000637325 SDHAP31040 664 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 RRM2P31350 389 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 GZMKP49863 264 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 MOGQ16653 247 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 MESTQ5EB52 335 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 C6orf52Q5T4I8 152 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 SMARCD3Q6STE5 483 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 CYP2R1Q6VVX0 501 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 DPY19L2P2Q6ZN68 376 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 FOXL2NBQ6ZUU3 175 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 FAM122BQ7Z309 247 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 ZDHHC21Q8IVQ6 265 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 ZNF786Q8N393 782 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 OR1J1Q8NGS3 322 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 ZNF416Q9BWM5 594 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 OR2H1Q9GZK4 316 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 BPESC1Q9GZL8 116 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 POLE4Q9NR33 117 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 SLCO1C1Q9NYB5 712 aa11.85□□□□□ -0.51
PNKP-228ENST00000637325 WNK2Q9Y3S1 2297 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 IGHV4-61A0A0C4DH41 118 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 SLC16A7O60669 478 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 KHDRBS3O75525 346 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms