RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 A6NIZ1 184 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 TTLL8A6PVC2 850 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 MCRIP1C9JLW8 97 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 MEN1O00255 615 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 SDC3O75056 442 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 OR2F2O95006 317 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 OR2A4O95047 310 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 AHSA1O95433 338 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 NTN1O95631 604 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 MT-ATP6P00846 226 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 MAS1P04201 325 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 LPLP06858 475 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 GP1BAP07359 652 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 ERCC1P07992 297 aaPredicted RBP3.61□□□□□ -1.83
SCN1A-214ENST00000637038 CD63P08962 238 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 ZNF35P13682 527 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 HOXB3P14651 431 aaPredicted RBP3.61□□□□□ -1.83
SCN1A-214ENST00000637038 TMEM11P17152 192 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 ANXA7P20073 488 aaKnown RBP3.61□□□□□ -1.83
SCN1A-214ENST00000637038 CD34P28906 385 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 CRABP1P29762 137 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 GRPRP30550 384 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 EMDP50402 254 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 RAP1BP61224 184 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 RAP1AP62834 184 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 CYCSP99999 105 aaKnown RBP3.61□□□□□ -1.83
SCN1A-214ENST00000637038 OR2F1Q13607 317 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 GPR18Q14330 331 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 GRM7Q14831 915 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 LPAL2Q16609 132 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 EIF5AL1Q6IS14 154 aaKnown RBP3.61□□□□□ -1.83
SCN1A-214ENST00000637038 STEAP1BQ6NZ63 245 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 ANKRD16Q6P6B7 361 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 ESPNLQ6ZVH7 1005 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 OVCH2Q7RTZ1 564 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 NUP54Q7Z3B4 507 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 GPAT4Q86UL3 456 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 NR2C2APQ86WQ0 139 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 NPEPL1Q8NDH3 523 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 OR10H5Q8NGA6 315 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 OR10Z1Q8NGY1 313 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 TSACCQ96A04 125 aaPredicted RBP3.61□□□□□ -1.83
SCN1A-214ENST00000637038 TMEM106AQ96A25 262 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 RASD2Q96D21 266 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 RBP7Q96R05 134 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 OR2A7Q96R45 310 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 ALX4Q9H161 411 aaPredicted RBP3.61□□□□□ -1.83
SCN1A-214ENST00000637038 C6orf106Q9H6K1 298 aaPredicted RBP3.61□□□□□ -1.83
SCN1A-214ENST00000637038 FKRPQ9H9S5 495 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 SRA1Q9HD15 236 aaKnown RBP3.61□□□□□ -1.83
SCN1A-214ENST00000637038 NPDC1Q9NQX5 325 aaPredicted RBP3.61□□□□□ -1.83
SCN1A-214ENST00000637038 SOHLH2Q9NX45 425 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 OR5V1Q9UGF6 321 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 ATXN7L1Q9ULK2 861 aaPredicted RBP3.61□□□□□ -1.83
SCN1A-214ENST00000637038 CA5BQ9Y2D0 317 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 HS3ST3A1Q9Y663 406 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 TRAV36DV7A0A075B6V5 113 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 CCDC187A0A096LP49 1063 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 A0A1W2PS29 197 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 OR2AT4A6NND4 320 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 ZNF736B4DX44 427 aaPredicted RBP3.61□□□□□ -1.83
SCN1A-214ENST00000637038 D6RAR5 112 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 STMND1H3BQB6 276 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 CYR61O00622 381 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 ZNF264O43296 627 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 KLF8O95600 359 aaPredicted RBP3.61□□□□□ -1.83
SCN1A-214ENST00000637038 CBX7O95931 251 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 COX6B1P14854 86 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 RPA2P15927 270 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 MGMTP16455 207 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 AQP2P41181 271 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 PTH2RP49190 550 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 SELENOPP49908 381 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 HLXQ14774 488 aaPredicted RBP3.61□□□□□ -1.83
SCN1A-214ENST00000637038 GAB4Q2WGN9 574 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 RNASE10Q5GAN6 216 aaKnown RBP3.61□□□□□ -1.83
SCN1A-214ENST00000637038 EXOSC6Q5RKV6 272 aaKnown RBP3.61□□□□□ -1.83
SCN1A-214ENST00000637038 TANGO2Q6ICL3 276 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 FAM199XQ6PEV8 388 aaPredicted RBP3.61□□□□□ -1.83
SCN1A-214ENST00000637038 PEG10Q86TG7 708 aaKnown RBP3.61□□□□□ -1.83
SCN1A-214ENST00000637038 MCATQ8IVS2 390 aaKnown RBP3.61□□□□□ -1.83
SCN1A-214ENST00000637038 TMEM229BQ8NBD8 167 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 OR11G2Q8NGC1 345 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 OR11H4Q8NGC9 324 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 OR4D9Q8NGE8 314 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 FAM46BQ96A09 425 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 CCDC74AQ96AQ1 378 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 LRRC3BQ96PB8 259 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 USB1Q9BQ65 265 aaKnown RBP3.61□□□□□ -1.83
SCN1A-214ENST00000637038 TBL1XR1Q9BZK7 514 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 DNTTIP1Q9H147 329 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 IFT22Q9H7X7 185 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 TAS2R3Q9NYW6 316 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 COPS7AQ9UBW8 275 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 EPHA6Q9UF33 1036 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 FLVCR2Q9UPI3 526 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 ERVK-19Q9WJR5 959 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 HIF3AQ9Y2N7 669 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 MEMO1Q9Y316 297 aa3.61□□□□□ -1.83
SCN1A-214ENST00000637038 MMACHCQ9Y4U1 282 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms