RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 NKD1Q969G9 470 aa16.92■□□□□ 0.3
CLN5-216ENST00000636780 MRPL48Q96GC5 212 aaKnown RBP16.92■□□□□ 0.3
CLN5-216ENST00000636780 SOX7Q9BT81 388 aa16.92■□□□□ 0.3
CLN5-216ENST00000636780 SLITRK2Q9H156 845 aa16.92■□□□□ 0.3
CLN5-216ENST00000636780 COLQQ9Y215 455 aaPredicted RBP16.92■□□□□ 0.3
CLN5-216ENST00000636780 TRAV18A0A075B6X5 111 aa16.91■□□□□ 0.3
CLN5-216ENST00000636780 SLC2A1P11166 492 aa16.91■□□□□ 0.3
CLN5-216ENST00000636780 C2orf76Q3KRA6 126 aa16.91■□□□□ 0.3
CLN5-216ENST00000636780 LYSMD4Q5XG99 296 aa16.91■□□□□ 0.3
CLN5-216ENST00000636780 ZNF679Q8IYX0 411 aa16.91■□□□□ 0.3
CLN5-216ENST00000636780 FCAMRQ8WWV6 532 aa16.91■□□□□ 0.3
CLN5-216ENST00000636780 SHDQ96IW2 340 aa16.91■□□□□ 0.3
CLN5-216ENST00000636780 CDX2Q99626 313 aaPredicted RBP16.91■□□□□ 0.3
CLN5-216ENST00000636780 NUBP2Q9Y5Y2 271 aa16.91■□□□□ 0.3
CLN5-216ENST00000636780 ANKRD34BA5PLL1 514 aa16.91■□□□□ 0.3
CLN5-216ENST00000636780 KRT33AO76009 404 aa16.91■□□□□ 0.3
CLN5-216ENST00000636780 EPHA8P29322 1005 aaPredicted RBP16.91■□□□□ 0.3
CLN5-216ENST00000636780 ERP29P30040 261 aaKnown RBP16.91■□□□□ 0.3
CLN5-216ENST00000636780 CCDC157Q569K6 752 aa16.91■□□□□ 0.3
CLN5-216ENST00000636780 UXS1Q8NBZ7 420 aa16.91■□□□□ 0.3
CLN5-216ENST00000636780 TRIM3O75382 744 aaPredicted RBP16.9■□□□□ 0.3
CLN5-216ENST00000636780 ZNF254O75437 659 aa16.9■□□□□ 0.3
CLN5-216ENST00000636780 CCL4P13236 92 aa16.9■□□□□ 0.3
CLN5-216ENST00000636780 BIDP55957 195 aa16.9■□□□□ 0.3
CLN5-216ENST00000636780 DCDP81605 110 aaKnown RBP16.9■□□□□ 0.3
CLN5-216ENST00000636780 SLC18B1Q6NT16 456 aa16.9■□□□□ 0.3
CLN5-216ENST00000636780 KCTD20Q7Z5Y7 419 aa16.9■□□□□ 0.3
CLN5-216ENST00000636780 SPACA5Q96QH8 159 aa16.9■□□□□ 0.3
CLN5-216ENST00000636780 SPSB2Q99619 263 aa16.9■□□□□ 0.3
CLN5-216ENST00000636780 GAREM1Q9H706 876 aa16.9■□□□□ 0.3
CLN5-216ENST00000636780 KLHL9Q9P2J3 617 aa16.9■□□□□ 0.3
CLN5-216ENST00000636780 CPAMD8Q8IZJ3 1885 aa16.9■□□□□ 0.3
CLN5-216ENST00000636780 TRBV5-7A0A0A0MS05 114 aa16.9■□□□□ 0.3
CLN5-216ENST00000636780 P2RY10O00398 339 aa16.9■□□□□ 0.3
CLN5-216ENST00000636780 GPR171O14626 319 aa16.9■□□□□ 0.3
CLN5-216ENST00000636780 SLC26A5P58743 744 aa16.9■□□□□ 0.3
CLN5-216ENST00000636780 BTG1P62324 171 aa16.9■□□□□ 0.3
CLN5-216ENST00000636780 B3GNTL1Q67FW5 361 aaPredicted RBP16.9■□□□□ 0.3
CLN5-216ENST00000636780 IQCF2Q8IXL9 164 aa16.9■□□□□ 0.3
CLN5-216ENST00000636780 C9orf62Q8N4C0 152 aa16.9■□□□□ 0.3
CLN5-216ENST00000636780 MCHR2Q969V1 340 aa16.9■□□□□ 0.3
CLN5-216ENST00000636780 HAVCR1Q96D42 359 aa16.9■□□□□ 0.3
CLN5-216ENST00000636780 METTL17Q9H7H0 456 aaPredicted RBP16.9■□□□□ 0.3
CLN5-216ENST00000636780 CA10Q9NS85 328 aa16.9■□□□□ 0.3
CLN5-216ENST00000636780 RARRES3Q9UL19 164 aa16.9■□□□□ 0.3
CLN5-216ENST00000636780 MRPS18BQ9Y676 258 aaKnown RBP16.9■□□□□ 0.3
CLN5-216ENST00000636780 C7orf66A4D0T2 115 aa16.89■□□□□ 0.29
CLN5-216ENST00000636780 NPIPA5E9PKD4 350 aa16.89■□□□□ 0.29
CLN5-216ENST00000636780 CAPZA2P47755 286 aa16.89■□□□□ 0.29
CLN5-216ENST00000636780 CLDN6P56747 220 aa16.89■□□□□ 0.29
CLN5-216ENST00000636780 EGR3Q06889 387 aa16.89■□□□□ 0.29
CLN5-216ENST00000636780 PIAS4Q8N2W9 510 aaPredicted RBP16.89■□□□□ 0.29
CLN5-216ENST00000636780 SAP25Q8TEE9 199 aa16.89■□□□□ 0.29
CLN5-216ENST00000636780 ASB5Q8WWX0 329 aa16.89■□□□□ 0.29
CLN5-216ENST00000636780 MIB2Q96AX9 1013 aa16.89■□□□□ 0.29
CLN5-216ENST00000636780 ZNF775Q96BV0 537 aaPredicted RBP16.89■□□□□ 0.29
CLN5-216ENST00000636780 CCNL2Q96S94 520 aaPredicted RBP16.89■□□□□ 0.29
CLN5-216ENST00000636780 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.89■□□□□ 0.29
CLN5-216ENST00000636780 EMC7Q9NPA0 242 aa16.89■□□□□ 0.29
CLN5-216ENST00000636780 SEMA5BQ9P283 1151 aa16.89■□□□□ 0.29
CLN5-216ENST00000636780 NPIPA1Q9UND3 350 aa16.89■□□□□ 0.29
CLN5-216ENST00000636780 TMEM212A6NML5 194 aa16.89■□□□□ 0.29
CLN5-216ENST00000636780 SIX6O95475 246 aa16.89■□□□□ 0.29
CLN5-216ENST00000636780 GLYATL3Q5SZD4 288 aa16.89■□□□□ 0.29
CLN5-216ENST00000636780 BTN2A1Q7KYR7 527 aa16.89■□□□□ 0.29
CLN5-216ENST00000636780 ZNF431Q8TF32 576 aaPredicted RBP16.89■□□□□ 0.29
CLN5-216ENST00000636780 METTL7AQ9H8H3 244 aa16.89■□□□□ 0.29
CLN5-216ENST00000636780 SEC61A2Q9H9S3 476 aa16.89■□□□□ 0.29
CLN5-216ENST00000636780 GABARAPH6UMI1 98 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 MT-ATP6P00846 226 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 CD1AP06126 327 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 CSRP1P21291 193 aaKnown RBP16.88■□□□□ 0.29
CLN5-216ENST00000636780 MYBPHQ13203 477 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 PCGF3Q3KNV8 242 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 MOGAT2Q3SYC2 334 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 OR56B4Q8NH76 319 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 PRO3102Q9H379 93 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 NOX3Q9HBY0 568 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 MEN1O00255 615 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 IGF2P01344 180 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 HSF1Q00613 529 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 GLO1Q04760 184 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 C17orf67Q0P5P2 114 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 NHLRC1Q6VVB1 395 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 CPEB2Q7Z5Q1 589 aaKnown RBP16.88■□□□□ 0.29
CLN5-216ENST00000636780 ZNF248Q8NDW4 579 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 OR1J4Q8NGS1 313 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 POC1BQ8TC44 478 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 RNF128Q8TEB7 428 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 HGDQ93099 445 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 FAM46BQ96A09 425 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 CLDN23Q96B33 292 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 SLC25A44Q96H78 314 aaPredicted RBP16.88■□□□□ 0.29
CLN5-216ENST00000636780 ATG5Q9H1Y0 275 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 VSX1Q9NZR4 365 aaPredicted RBP16.88■□□□□ 0.29
CLN5-216ENST00000636780 PPP4R1LQ9P1A2 415 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 STEAP1Q9UHE8 339 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 DHDHQ9UQ10 334 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 TMEM14AQ9Y6G1 99 aa16.88■□□□□ 0.29
CLN5-216ENST00000636780 AHCTF1Q8WYP5 2266 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms