RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 IFNGP01579 166 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 CRHP06850 196 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 KIR2DL2P43627 348 aaPredicted RBP12.78□□□□□ -0.36
LINC00339-208ENST00000634934 LSM3P62310 102 aaKnown RBP12.78□□□□□ -0.36
LINC00339-208ENST00000634934 LCN6P62502 163 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 SNAPC1Q16533 368 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 MESTQ5EB52 335 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 PTCHD4Q6ZW05 846 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 FAM26EQ8N5C1 309 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 SYT14Q8NB59 555 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 OR52E2Q8NGJ4 325 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 ZNF519Q8TB69 540 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 RND1Q92730 232 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 SLC25A44Q96H78 314 aaPredicted RBP12.78□□□□□ -0.36
LINC00339-208ENST00000634934 SLC38A2Q96QD8 506 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 OR2M2Q96R28 347 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 PRRG3Q9BZD7 231 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 RCE1Q9Y256 329 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 ESPL1Q14674 2120 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 A0A0G2JNJ9 132 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 A0A1B0GUH1 482 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 HSPB2A8KAH6 182 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 M0R129 80 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 ZNF432O94892 652 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 IGHG1P01857 330 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 CTSSP25774 331 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 CLRN1P58418 232 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 SRSF1Q07955 248 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC00339-208ENST00000634934 MLLT11Q13015 90 aaPredicted RBP12.78□□□□□ -0.36
LINC00339-208ENST00000634934 GUSBP1Q15486 140 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 HSPB2Q16082 182 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 SPANXN2Q5MJ10 180 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 LEG1Q6P5S2 330 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 VWA1Q6PCB0 445 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 ZBTB46Q86UZ6 589 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 TMEM123Q8N131 208 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 SDR9C7Q8NEX9 313 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 OR6K3Q8NGY3 331 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 OR6N1Q8NGY5 312 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 APH1AQ96BI3 265 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 OTULINQ96BN8 352 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 NMNAT3Q96T66 252 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 MND1Q9BWT6 205 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 Q9UFV3 132 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 KLHL21Q9UJP4 597 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 GRIP1Q9Y3R0 1128 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 ALPK2Q86TB3 2170 aa12.77□□□□□ -0.36
LINC00339-208ENST00000634934 MED12LQ86YW9 2145 aa12.77□□□□□ -0.36
LINC00339-208ENST00000634934 USP9XQ93008 2570 aaPredicted RBP12.77□□□□□ -0.37
LINC00339-208ENST00000634934 IQCMA0A1B0GVH7 501 aa12.77□□□□□ -0.37
LINC00339-208ENST00000634934 SURF4O15260 269 aa12.77□□□□□ -0.37
LINC00339-208ENST00000634934 TNFSF13O75888 250 aa12.77□□□□□ -0.37
LINC00339-208ENST00000634934 KRT33AO76009 404 aa12.77□□□□□ -0.37
LINC00339-208ENST00000634934 IGHV3-9P01782 118 aa12.77□□□□□ -0.37
LINC00339-208ENST00000634934 ZNF3P17036 446 aa12.77□□□□□ -0.37
LINC00339-208ENST00000634934 EDNRAP25101 427 aa12.77□□□□□ -0.37
LINC00339-208ENST00000634934 CDKN2AP42771 156 aaKnown RBP12.77□□□□□ -0.37
LINC00339-208ENST00000634934 CSNK1A1P48729 337 aa12.77□□□□□ -0.37
LINC00339-208ENST00000634934 EIF2B2P49770 351 aaKnown RBP12.77□□□□□ -0.37
LINC00339-208ENST00000634934 LGALS3BPQ08380 585 aa12.77□□□□□ -0.37
LINC00339-208ENST00000634934 STEAP3Q658P3 488 aa12.77□□□□□ -0.37
LINC00339-208ENST00000634934 UBE2J2Q8N2K1 259 aa12.77□□□□□ -0.37
LINC00339-208ENST00000634934 PARP16Q8N5Y8 322 aa12.77□□□□□ -0.37
LINC00339-208ENST00000634934 CYB561A3Q8NBI2 242 aa12.77□□□□□ -0.37
LINC00339-208ENST00000634934 TMEM80Q96HE8 168 aa12.77□□□□□ -0.37
LINC00339-208ENST00000634934 SFXN3Q9BWM7 321 aa12.77□□□□□ -0.37
LINC00339-208ENST00000634934 CMC2Q9NRP2 79 aa12.77□□□□□ -0.37
LINC00339-208ENST00000634934 NDUFB11Q9NX14 153 aa12.77□□□□□ -0.37
LINC00339-208ENST00000634934 GPR52Q9Y2T5 361 aa12.77□□□□□ -0.37
LINC00339-208ENST00000634934 HIVEP3Q5T1R4 2406 aa12.77□□□□□ -0.37
LINC00339-208ENST00000634934 DOCK7Q96N67 2140 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 UTP20O75691 2785 aaKnown RBP12.76□□□□□ -0.37
LINC00339-208ENST00000634934 PRSS37A4D1T9 235 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 PRKYO43930 277 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 RENP00797 406 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 TRAPPC2P0DI81 140 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 TRAPPC2BP0DI82 140 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 PGA4P0DJD7 388 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 PGA3P0DJD8 388 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 BMP5P22003 454 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 OPRM1P35372 400 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 OR3A2P47893 321 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 PCYT1AP49585 367 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 EFNB1P98172 346 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 CRMP1Q14194 572 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 C4orf17Q53FE4 359 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 C20orf196Q8IYI0 205 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 GPR137CQ8N3F9 429 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 TCEANCQ8N8B7 351 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 SLC37A3Q8NCC5 494 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 NOXO1Q8NFA2 376 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 STARD4Q96DR4 205 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 OPALINQ96PE5 141 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 RBP7Q96R05 134 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 IL4I1Q96RQ9 567 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 KCNK17Q96T54 332 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 MED18Q9BUE0 208 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 MRPL13Q9BYD1 178 aaKnown RBP12.76□□□□□ -0.37
LINC00339-208ENST00000634934 OR51E2Q9H255 320 aa12.76□□□□□ -0.37
LINC00339-208ENST00000634934 SLCO5A1Q9H2Y9 848 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms